Pairwise Alignments

Query, 480 a.a., ATP-dependent RNA helicase RhlB from Pseudomonas putida KT2440

Subject, 473 a.a., DNA/RNA helicase, superfamily II from Dechlorosoma suillum PS

 Score =  294 bits (753), Expect = 4e-84
 Identities = 160/379 (42%), Positives = 228/379 (60%), Gaps = 4/379 (1%)

Query: 93  FHDFKLSNELMHAIHDLGFPYCTPIQAQVLGYTLRGQDAIGRAQTGTGKTAAF---LISI 149
           F D  L  E++ AI + G+   TPIQ Q +   L G+D +  AQTGTGKTA F   ++ +
Sbjct: 3   FTDLGLKAEILRAIAEQGYTEPTPIQQQAIPAVLAGRDLMACAQTGTGKTAGFTLPILQL 62

Query: 150 ISQLQQTPPPKERYMGEPRALIIAPTRELVVQIAKDAAALTKYTGLNVMSFVGGMDFDKQ 209
           +SQ Q    P  R   +PR LI+APTREL +Q+ +      ++  L  MS  GG+  + Q
Sbjct: 63  LSQAQAGESPLNRLARKPRVLILAPTRELALQVEESVRTYGQHLPLKSMSMFGGVGMNPQ 122

Query: 210 LKALEARHCDILVATPGRLLDFNQRGEVHLDMVEVMVLDEADRMLDMGFIPQVRQIIRQT 269
           + AL+ R  DILVA PGRLLD   +  + L  +E++VLDEADRMLDMGFI  +R+I+   
Sbjct: 123 IAALK-RGVDILVACPGRLLDHINQRTLDLSGIEILVLDEADRMLDMGFIRDIRKILALL 181

Query: 270 PPKSERQTLLFSATFTDDVMNLAKQWTTNPAIVEIEPENVASETVEQHVYAVAGSDKYKL 329
           PP  +RQ LLFSATF+D++  LA+ +  +P  +E+   N   ETV Q V  V    K  +
Sbjct: 182 PPNGKRQNLLFSATFSDEIKELARSFLHDPQSIEVARRNTTVETVSQKVIHVDREKKKDV 241

Query: 330 LYNLVTQNKWERVMVFANRKDEVRRIEEKLVRDGINAAQLSGDVPQHKRIRTLESFREGR 389
           L +L     W +V++F   K     +  +L ++GI +A L G+  Q  R+R L  F+EG+
Sbjct: 242 LLHLFENRGWNQVLIFTRTKHGADALSRRLDKEGIRSAALHGNKTQGARVRALTEFKEGK 301

Query: 390 ITVLVATDVAGRGIHIDGISHVINFTLPEDPDDYVHRIGRTGRAGTSGVSISFAGEDDSY 449
           +  LVATD+A RGI ID + +V+N+ LP   +DYVHRIGRTGRAG  G +IS    D+  
Sbjct: 302 LVALVATDIAARGIDIDQLPYVVNYELPNVAEDYVHRIGRTGRAGAEGEAISLVCHDERD 361

Query: 450 QLPAIEALLGRKIKCEMPP 468
            L +IE L+ + ++ E+ P
Sbjct: 362 NLRSIERLIKKDLEKEVLP 380