Pairwise Alignments

Query, 480 a.a., ATP-dependent RNA helicase RhlB from Pseudomonas putida KT2440

Subject, 443 a.a., DNA/RNA helicase, superfamily II from Dechlorosoma suillum PS

 Score =  273 bits (697), Expect = 1e-77
 Identities = 154/370 (41%), Positives = 213/370 (57%), Gaps = 5/370 (1%)

Query: 93  FHDFKLSNELMHAIHDLGFPYCTPIQAQVLGYTLRGQDAIGRAQTGTGKTAAFLISIISQ 152
           F D  L   L+ A+  LG+   TP+Q + +   L G D +  AQTGTGKTA+F + ++ +
Sbjct: 3   FADLDLVPPLLEALDVLGYQTPTPVQEKAIPAVLAGGDLMAAAQTGTGKTASFALPLLQR 62

Query: 153 LQQTPPPKERYMGEPRALIIAPTRELVVQIAKDAAALTKYTGLNVMSFVGGMDFDKQLKA 212
           L   P P        RALI+ PTREL  Q+     A  ++  L   +  GG+  + Q+  
Sbjct: 63  LAHDPEPTAS--NSTRALILVPTRELAQQVCDSFVAYGQFLVLRSYAVYGGVSINPQMMK 120

Query: 213 LEARHCDILVATPGRLLDFNQRGEVHLDMVEVMVLDEADRMLDMGFIPQVRQIIRQTPPK 272
           L  +  DILVATPGRLLD +++  V  D V  +VLDEADRMLD+GF  ++  +    P  
Sbjct: 121 LR-KGVDILVATPGRLLDLHRQNAVRFDQVRTLVLDEADRMLDLGFARELNALFALLP-- 177

Query: 273 SERQTLLFSATFTDDVMNLAKQWTTNPAIVEIEPENVASETVEQHVYAVAGSDKYKLLYN 332
            +RQTLLFSATF+D + ++A Q    P  +E    N  +  ++Q V  V    K  L  +
Sbjct: 178 KQRQTLLFSATFSDAIRSMADQLLKKPLSIETARPNATARGIKQWVVPVDKKRKSALFCH 237

Query: 333 LVTQNKWERVMVFANRKDEVRRIEEKLVRDGINAAQLSGDVPQHKRIRTLESFREGRITV 392
           L    KW++V+VF   +  V  + E L   GI A  + GD PQ  R+R LESF+ G++ V
Sbjct: 238 LYKHKKWDQVLVFVKTRKGVDELVETLTAKGIAAESIHGDKPQPARLRALESFKAGQVRV 297

Query: 393 LVATDVAGRGIHIDGISHVINFTLPEDPDDYVHRIGRTGRAGTSGVSISFAGEDDSYQLP 452
           LVATDVA RG+ ID +  V+NF LP  P+DYVHRIGRT RAG SG ++S    D+   L 
Sbjct: 298 LVATDVASRGLDIDDLPRVVNFDLPIVPEDYVHRIGRTARAGASGEAVSLVCADEVNLLG 357

Query: 453 AIEALLGRKI 462
           AIE L+G+ +
Sbjct: 358 AIEVLIGQPL 367