Pairwise Alignments

Query, 480 a.a., ATP-dependent RNA helicase RhlB from Pseudomonas putida KT2440

Subject, 421 a.a., ATP-dependent RNA helicase RhlB from Klebsiella michiganensis M5al

 Score =  325 bits (833), Expect = 2e-93
 Identities = 177/387 (45%), Positives = 240/387 (62%), Gaps = 2/387 (0%)

Query: 92  RFHDFKLSNELMHAIHDLGFPYCTPIQAQVLGYTLRGQDAIGRAQTGTGKTAAFLISIIS 151
           +F DF L   ++ A+   GF  CTPIQA  L  TL G+D  G+AQTGTGKT AFL S   
Sbjct: 10  KFSDFALHPAVIEALEKKGFHNCTPIQALALPLTLEGRDVAGQAQTGTGKTMAFLTSTFH 69

Query: 152 QLQQTPPPKERYMGEPRALIIAPTRELVVQIAKDAAALTKYTGLNVMSFVGGMDFDKQLK 211
            L   P   +R + +PRALI+APTREL VQI  DA  L + TGL +    GG  +DKQLK
Sbjct: 70  YLLTHPAIADRQVNQPRALIMAPTRELAVQIHADAEPLAQSTGLKLGLAYGGDGYDKQLK 129

Query: 212 ALEARHCDILVATPGRLLDFNQRGEVHLDMVEVMVLDEADRMLDMGFIPQVRQIIRQTPP 271
            LE+   DIL+ T GRL+D+ ++  ++L  ++V+VLDEADRM D+GFI  +R + R+ PP
Sbjct: 130 VLESG-VDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188

Query: 272 KSERQTLLFSATFTDDVMNLAKQWTTNPAIVEIEPENVASETVEQHVYAVAGSDKYKLLY 331
            ++R  +LFSAT +  V  LA +   N   VE+EPE      +++ ++  +  +K +LL 
Sbjct: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYVEVEPEQKTGHRIKEELFYPSNEEKMRLLQ 248

Query: 332 NLVTQNKWERVMVFANRKDEVRRIEEKLVRDGINAAQLSGDVPQHKRIRTLESFREGRIT 391
            L+ +   +R ++FAN K     I   L  DG     L+GDV Q KR+R L+ F  G I 
Sbjct: 249 TLLEEEWPDRAIIFANTKHRCEDIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDID 308

Query: 392 VLVATDVAGRGIHIDGISHVINFTLPEDPDDYVHRIGRTGRAGTSGVSISFAGEDDSYQL 451
           +LVATDVA RG+HI  ++HV N+ LP+D +DYVHRIGRTGRAG SG SIS A E+ +  L
Sbjct: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368

Query: 452 PAIEALLGRKIK-CEMPPDELLKPVPR 477
           PAIE  +G  I   +   D L+  +PR
Sbjct: 369 PAIETYIGHSIPVSKYNSDALMTELPR 395