Pairwise Alignments

Query, 484 a.a., putative Multidrug efflux MFS outer membrane protein from Pseudomonas putida KT2440

Subject, 465 a.a., RND efflux system, outer membrane lipoprotein, NodT from Pseudomonas syringae pv. syringae B728a

 Score =  253 bits (646), Expect = 1e-71
 Identities = 157/465 (33%), Positives = 250/465 (53%), Gaps = 11/465 (2%)

Query: 9   PLLLAVLLTGCTLGPDFQRPDSQAPQQWAPLQGEAAASQPQAEPLELRWWETFHDARLSA 68
           P LL + L  C +GPD+Q P + AP + A     AA        ++  WW+ F D  L+ 
Sbjct: 9   PSLLVMALAACAVGPDYQAPVT-APAKLA----SAAQGNYDRSKVDRVWWQQFEDPTLNK 63

Query: 69  LIQRVAERNLDLQMASARLLQSRALRSTLAADEVPSVDVNAGYSRARNSADGLSDPSGKA 128
           L+ R  + N DL++A ARL  +RA+R  +A D +P V   A     +    G+++   + 
Sbjct: 64  LVARSLDGNRDLRVAFARLKSARAIRDDVANDVMPVVTSRASSDIGKGQQPGITER--RV 121

Query: 129 GKEAFNLWQGDLVAGWELDLWGRVRRQVEAADATVEVAENDRRGVLLALLSETAGNYIQL 188
             E ++L    L   WE+DL+GR++RQ+EA+DA  + AE +   + + L++E    Y QL
Sbjct: 122 NSERYDL---GLDMAWEVDLFGRIQRQLEASDADQDAAEANLYQLQVTLIAEVVDAYGQL 178

Query: 189 RAVQHTLDVTQDNLRVARHSLKLSQDRQAEGVATRLDVAQASAQVASIESRLPSLEAQRD 248
           R  Q    + +DNL+  + S  ++   +  GV   LDV +A A++A++E+ +P L+A++ 
Sbjct: 179 RGAQLREAIARDNLKNQQSSQDVTTQLRDAGVGNELDVVRAEARLAAVEASVPQLQAEQA 238

Query: 249 DLINALSLLAAEPPRSLQAELLQGGELPAPQQKFAIGLPSELAERRPDIRQAEARLHAAT 308
              N ++ L  E P +L  +L    +LPA  +   IG P+++   RPDIR AE +L A+T
Sbjct: 239 RQRNRIATLLGERPENLSVDL-SPSKLPAIAKALPIGDPTQVLRNRPDIRAAERQLAAST 297

Query: 309 ASIGVAKADFYPSIRLSGSVGFQALQLSDFGGWDSRRFAFGPQMSLPIFEGGRLKGTLEL 368
           A IGVA AD +P + LSG +GF A + S  G   +R ++ GP ++   F+ G ++  +  
Sbjct: 298 ARIGVATADLFPRVSLSGFLGFTAGRGSQIGSSAARAWSLGPSITWAAFDLGSVRAQIRS 357

Query: 369 REAQQQEAALNYRKVVLGAWHEIDDVLRLYNASQLRRDHLAEAVRQNRIALETAQRQYVE 428
            +A  + A  NY + VL A  E ++    Y+  Q R   L      +R A   A  QY E
Sbjct: 358 ADADAEGALANYEQQVLLALEESENAFSDYDKRQQRLVSLMRQSDASRSAARLASVQYRE 417

Query: 429 GAVDFLNVLTVQGALLASEEQWIDSSAAVSQALVGLYKALGGGWQ 473
           G  DFL +L  +   LA+E+    +   + + +V +YKALGGGWQ
Sbjct: 418 GTADFLVLLDAERERLAAEDAQAQAEIELYRGIVAIYKALGGGWQ 462