Pairwise Alignments

Query, 367 a.a., putative Multidrug efflux MFS membrane fusion protein from Pseudomonas putida KT2440

Subject, 406 a.a., HlyD family secretion protein from Vibrio cholerae E7946 ATCC 55056

 Score =  181 bits (458), Expect = 4e-50
 Identities = 124/364 (34%), Positives = 191/364 (52%), Gaps = 20/364 (5%)

Query: 13  IEMTNNRKTLFIGSVLAVAVLAGIVGP-WMFGSDHRQSTNDAYVTADYTVVAPKVAGFIK 71
           +    +RK  F+G   A+ V  G     W F      ST++AY  A+   V P V G I 
Sbjct: 24  VRAAQSRKKGFLGLAAAIVVAGGSYALYWHFIGSRYISTDNAYAAAEIAEVTPAVGGIIA 83

Query: 72  QVLVEDNQQVTAGQLLATIDARDYQAALDAAQAQLLVAQ-------AQSADARATLERQD 124
           QV V D + V  G +L  +D  D + AL  A+A L +A+       A      A +E Q+
Sbjct: 84  QVNVVDTEYVKQGDVLVQLDDTDARLALLQAEADLALAKRRVRSYLANDEGLSAMVEAQE 143

Query: 125 ALIAQAEAAVKAAQAEVAFADHEVNRYSRLAEQGAGTVQNAQQARSAVDQARARLANAQA 184
           A   + +A +KAAQA+   A  +++R   L   G+ + +    A++   QA+A L  A+A
Sbjct: 144 ANEQRVKAQLKAAQADFERAKIDLSRREDLVRSGSVSGEELTNAKTGFAQAQANLNAAKA 203

Query: 185 ARVAARK-QVDILTAQVASA----------DGQLKRAEAGLEKAQLDLSYTRITAPVDGM 233
           A   A+  ++  + +Q A+A          + ++  A+A  E+A++DL  T I AP+ G+
Sbjct: 204 AMAQAQATKLSTIGSQKANAALTDNTTVDSNPEVLLAKARYEQAKIDLERTVIRAPISGI 263

Query: 234 VGERALRVGAYVNPGARLLSVVPLQQAYVVGNFQETQLTHVQPGQPVRISVDTFSGE-TL 292
           V +R ++VG  V  G  L++VVP    YV  NF+E +L  V+ GQPV ++ D +  + T 
Sbjct: 264 VAKRQVQVGRRVQVGMPLMTVVPTDHIYVDANFKEVELRDVKVGQPVTLTADLYGDDVTY 323

Query: 293 QGHVQSIAPATGVTFAAVKPDNATGNFTKVVQRIPVKIVLDDGQPLLTRLRVGMSVEATI 352
            G V   +  TG  F+ +   NATGN+ KVVQR+P++I LD        L+VG+S+ ATI
Sbjct: 324 HGVVAGFSGGTGSAFSMIPAQNATGNWIKVVQRLPIRIELDPKDLQAYPLQVGLSMVATI 383

Query: 353 DTRG 356
           DT G
Sbjct: 384 DTAG 387