Pairwise Alignments

Query, 473 a.a., Group II intron-encoding maturase from Pseudomonas putida KT2440

Subject, 607 a.a., putative maturase/reverse transcriptase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  138 bits (347), Expect = 6e-37
 Identities = 82/206 (39%), Positives = 118/206 (57%), Gaps = 8/206 (3%)

Query: 68  AYQRVVSNKG--APGADGMTVADLA-GYVRQYWPTLKVRLLAGEYQPQAVRAVEIPKPQG 124
           AYQ + S  G    GADG T+  ++   V Q   +LK       YQP   +   IPK  G
Sbjct: 38  AYQNIYSKTGNMTAGADGKTIDGMSIDRVEQLIGSLKNET----YQPNPSKRTYIPKKNG 93

Query: 125 GTRQLGIPSVVDRLIQQALQQQLTPIFDPLFSDYSYGFRPGRSTHQAIEMARAHVTAGHR 184
             R LGIPS  D+L+Q+ ++  L  I++  F   S+GFRP RS H A+   +   TA  +
Sbjct: 94  KKRPLGIPSFDDKLVQEVVRMILEAIYEGSFEHTSHGFRPKRSCHTALIDIQKTFTAV-K 152

Query: 185 WCVELDLEKFFDRVNHDILMACIERRIRDKCVLRLIRRYLEAGIMSGGVVSPRQEGTPQG 244
           W +E D++ FFD +NHD+L+  +  RI D+  LRLIR++L AG +   V      GTPQG
Sbjct: 153 WFIEGDIKGFFDNINHDVLINILRERIADERFLRLIRKFLNAGYVEDWVFHRTYSGTPQG 212

Query: 245 GPLSPLLSNILLDELDRELERRGHRF 270
           G +SP+L+NI LD+ D+ ++   +RF
Sbjct: 213 GIISPILANIYLDKFDKYIKEYINRF 238