Pairwise Alignments

Query, 356 a.a., putative permease from Pseudomonas putida KT2440

Subject, 348 a.a., hypothetical protein from Synechococcus elongatus PCC 7942

 Score = 99.8 bits (247), Expect = 1e-25
 Identities = 85/311 (27%), Positives = 158/311 (50%), Gaps = 13/311 (4%)

Query: 37  GMLAPVLAGMVLAFLMQGLVNALERVRVPTRLAVMLVFALFMGALAVFMLVLVPLLWHQL 96
           G ++  L+  +L+F++   V ALER RVP  LAV+++ A+ +  L +  + L+P+L +Q+
Sbjct: 40  GPISIFLSAALLSFILGLPVRALERWRVPRLLAVLIILAVIVVLLLLVTVTLLPILINQV 99

Query: 97  ITLFNELPGMLGK-WQSLLLLLPERYPHLVSDEQVLHAI-ESVRGEIGKFGQWALTFSLS 154
             L N LP  L   +Q   LL  E++P        L A+  +V   + +  Q ALT  L 
Sbjct: 100 SALANTLPRSLNDGFQQFQLL--EQHPFFSRIPLDLRAVLGTVVSRLSEQLQ-ALTSRLL 156

Query: 155 SLPL-LVNAMIYLVLVPILVFFFLKDRELIGRWVSGYLP-RQRTLLNRVGSEMNRQIANY 212
            L L + +  +  +L  ++ F+ L   + +   +  +LP R R   +R  S +     NY
Sbjct: 157 ELLLGVASGALQTMLTLVISFYLLLRGDEVWDGLYNWLPVRWR---SRARSALELSFRNY 213

Query: 213 IRGKGIEILICGIATYIAFISLGLNYAALLALLVGLSVVVPYVGAVVVTVPVTLIALFQW 272
           +  +     + G +  I  + LGL +  LL   +GL  + P+ G++ + V + ++ +F  
Sbjct: 214 LLSQMTIAFLIGSSATIVLLLLGLRFWLLLGCGIGLLAIFPFGGSISI-VSLAIVQMFSN 272

Query: 273 GWGDQFIYLMTVYAIIQALDGNVLVPLLFSEAVSLHPVAIICAVLLFGGLWGFWGIFFAI 332
            W   F  L+  +   Q ++ N++ P LF +++ +HPV ++ A+L+   L G  G+  A+
Sbjct: 273 PWLG-FRILVFCWGTDQLIE-NLIAPRLFGKSIGVHPVWVLMAILIGAQLGGLLGVILAV 330

Query: 333 PLATLIKAVLD 343
           P    ++ +LD
Sbjct: 331 PTVGCLRILLD 341