Pairwise Alignments

Query, 450 a.a., putrescine permease from Pseudomonas putida KT2440

Subject, 449 a.a., porin from Pseudomonas fluorescens FW300-N2E3

 Score =  266 bits (680), Expect = 1e-75
 Identities = 145/444 (32%), Positives = 254/444 (57%), Gaps = 15/444 (3%)

Query: 12  QLRKTLRLWHVIIIGLAYLTPMTVFDTFGIVSGITAGHVPSAYILALAGILFTAVSYGTL 71
           +L+++L L  +++ G+ ++ P+  F  +G V+    G VP AYI+ +  +LFTA+SYG++
Sbjct: 11  ELKRSLSLTDLVVYGMIFMIPIAPFGVYGYVNQEAPGMVPLAYIIGMVAMLFTALSYGSM 70

Query: 72  VKRFPQSGSAYTYTQRAINPHVGFLVGWSSLLDYLLLPMVNALLAKLYLSAMFPEVPEWM 131
            + FP +GS Y+Y QR ++PHVGF+ GW  LLDYLL+P +  + A + L+ ++P++P+  
Sbjct: 71  ARAFPIAGSVYSYAQRGLHPHVGFIAGWLMLLDYLLIPPLLYVYAAMALNHLYPDIPKVG 130

Query: 132 WVAGFVTLISLINMRSVNLVAHFNLLFVGVQVAIIAVFIYLCVRGLDQGEGLGTTWSLIP 191
           ++  F+   + +N+R +   A  N++F+  Q+ ++ +F++     L  G G G       
Sbjct: 131 FILAFLVSATFVNLRGITFTARMNIIFLLAQLVVLGIFLFYAWTALHGGAGNGQLTLAPL 190

Query: 192 FADSQTQFSALAAGATILCFSFLGFDAVTCLSEETR-DPAKTIPRAIFLTALIGGVVFIT 250
           +      F+ L    +I   SFLGFDA++ L+EE + DP +++ +A  +T ++ GV+F+ 
Sbjct: 191 YNPEHFNFALLMQAVSIAVLSFLGFDAISTLAEEIKGDPGRSVGKAALITLVVMGVIFV- 249

Query: 251 VSYFIQAYFPTMARFHDQEAALPEIALYVGGKLFQSIF-IACTVINTIASGLASQTSVSR 309
           V  +I         F   + A  EIA    G    ++  +A  +   +A  + SQ +VSR
Sbjct: 250 VQTWIATDLAAGMGFKSADTAFYEIAEIAAGSWLATVTGVATALAWGVAVAITSQAAVSR 309

Query: 310 LLYVMGRDNVIPASVFARLHSRYKTPVLNIAVVGLISLSAIFF---DLVTATSIINFGAL 366
           LL+ M RD  +P  V A++H ++ TP ++I +V ++SL   +     + T TS++NFGAL
Sbjct: 310 LLFGMARDGKLP-KVLAKVHPKHNTPYISIYLVAVLSLLICYLFINSVDTLTSLVNFGAL 368

Query: 367 VAFSFVNLSVINHCYLREGNRKGLANQLKYLVLPTIGFCIIVSLWLDLNAHSLMFGGIWA 426
             F  ++L+VIN+ + R+ +       +++LV P IGF I+ ++  ++   +   GGIW 
Sbjct: 369 SGFILLHLTVINYYWRRQKS----GQLIRHLVCPVIGFIIVSAILYNMGVDAQKLGGIWI 424

Query: 427 ALGLVYLGWLTK----AFRAAPPN 446
           A GLVYL +L +    A   AP N
Sbjct: 425 AAGLVYLFFLNRIGASAVLPAPSN 448