Pairwise Alignments

Query, 688 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

Subject, 639 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  269 bits (688), Expect = 3e-76
 Identities = 185/516 (35%), Positives = 278/516 (53%), Gaps = 24/516 (4%)

Query: 186 WLTCPQDTARTCMLEPYLDEVNGRQVLMTSIALPLLEHGKVVGVVGLDIGLANLQQ--LS 243
           W    +   +    EPY+      Q L+ ++A P+   G+++GV   ++ L  L +  L+
Sbjct: 135 WYKEAKAAGKPITTEPYVSVT--MQTLVVTLAEPVRYQGQLIGVAASNLALDKLIKDVLA 192

Query: 244 VNGRRDLFDGQGQVSIATAAGLLAGNSRDDSVLGKPMDKSVADGLLRVAHPFTPIPDTAP 303
           +        G+G   +    G +  +   D +L KP ++  A   L ++       D + 
Sbjct: 193 IE-----VPGKGYAILVNQKGKIVAHPTQDLIL-KPTEEMSAQ--LTISKLNIAAKDHSL 244

Query: 304 WQVVLELPESVLQAPAVA-----LNQRLDAHNQNANLTSLL-----IGLGTAIA-GLLLV 352
           +Q+ ++  + VL A  VA     L   +D       L  +L     IGLG  +   LL  
Sbjct: 245 FQLSMDGRDKVLMAEEVANTDWLLVMVMDKGVLEQPLNDMLMVQIGIGLGILLVMALLTS 304

Query: 353 WLTARGVTRPILAVAARLEDIASGEGDLTRRLDYAHQDELGQLTGWFNRFLDKLQPVIAQ 412
           W  AR +   +  +A  L DIA G+GDLTRRLD   QDE+G L   FN+F+D+L  ++  
Sbjct: 305 WFVARQLNE-LGNIANALADIAEGDGDLTRRLDVRSQDEVGLLADKFNKFVDRLHQMVKN 363

Query: 413 VKGSLQEARNTADQSAAIASQTSDGMQQQHREIEQVATAANEMSATALDVAHNASQAAQA 472
           V+         AD +AA A+Q S  ++ Q  EI  VATA  EM++   ++A NA   A+ 
Sbjct: 364 VREVSVALTQGADHAAASATQASKRIRTQQDEITMVATAVTEMASATAEIASNAENTAKN 423

Query: 473 ARAADQASQEGLQLVDSTRQGIDRLAAGMNTAMDEARALEDRSGQIGSVLEVIRTIAEQT 532
           A  + Q  ++G   +  ++Q ID+LA  +  A+     LE  + +I ++L  IR IAEQT
Sbjct: 424 ATQSVQLGEDGFAQMQQSKQSIDQLAQELTGAVRIISELEVHANEISTILSTIRGIAEQT 483

Query: 533 NLLALNAAIEAARAGEAGRGFAVVADEVRGLAQRTQVSVEEIRQVIEGLQQGTQDVVGAM 592
           NLLALNAAIEAARAGE GRGFAVVADEVR L+QRT  S EEI+  I GLQ+ T   V  M
Sbjct: 484 NLLALNAAIEAARAGEQGRGFAVVADEVRVLSQRTHASTEEIQTKIAGLQKVTTTAVSVM 543

Query: 593 HAGQRQAQDSAARMEQALPALQRIGEAVAVISDMNLQIASAAEEQSAVAEEVNRNVAGIR 652
               +  + S A + Q   +LQ I EA+  ISDM  QIASAAEEQS V  ++N N   +R
Sbjct: 544 TESHKLVETSVADVNQTGASLQAISEAIQQISDMATQIASAAEEQSLVTADINVNTESVR 603

Query: 653 DVTESLAGQADESARISQALNRLANQQQALMEQFRV 688
           +V++ LA +A +S + +++L+ +A +    + +F++
Sbjct: 604 EVSDQLAEEAQQSVQQAKSLHAMAQELNKEISRFKL 639