Pairwise Alignments

Query, 688 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

Subject, 624 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  285 bits (728), Expect = 6e-81
 Identities = 186/506 (36%), Positives = 287/506 (56%), Gaps = 10/506 (1%)

Query: 186 WLTCPQDTARTCMLEPYLDEVNGRQVLMTSIALPLLEH--GKVVGVVGLDIGLANLQQLS 243
           W    ++  +  +  PY D  +G   ++ S+A P+ +   G+ +G +  D+ LA L +L 
Sbjct: 126 WYKDAKNAGKLVITAPYADSASGE--ILVSVATPVKDSATGQFLGSIFYDVSLAELAEL- 182

Query: 244 VNGRRDLFDGQGQVSIATAAGLLAGNSRDDSVLGKPMDKSVADGLLRVAHPFTPIPDTAP 303
           VN  + LFD  G V I +  G    + + +   GKPM + + +  + V      I +  P
Sbjct: 183 VNEVK-LFDA-GYVFIVSEDGTTIAHPKKE-FNGKPMSEFLGESKINV-DTHQVIINGKP 238

Query: 304 WQVVLELPESVLQAPAVALNQRLD-AHNQNANLTSLLIGLGTAIAGLLLVWLTARGVTRP 362
           + V     E       V +++ +  A       ++L+  +   +  + ++    R + +P
Sbjct: 239 YAVSFSDVEGEDWYVGVVIDEEIAYAALDELRRSTLIFTVIALVISVFVLLFIVRVLMKP 298

Query: 363 ILAVAARLEDIASGEGDLTRRLDYAHQDELGQLTGWFNRFLDKLQPVIAQVKGSLQEARN 422
           +  +   ++++ASGEGDLT+RL     +E  +L   FN F + LQ  + Q K    E   
Sbjct: 299 LDTLNDAIQNVASGEGDLTQRLSTNTDEEFAKLAIGFNTFTETLQKQLIQSKAIGAEILR 358

Query: 423 TADQSAAIASQTSDGMQQQHREIEQVATAANEMSATALDVAHNASQAAQAARAADQASQE 482
            ++ ++    Q+++ M+ Q  E+EQ+ATA +EM+ T+ DVA+NA  AA AA+ AD A+  
Sbjct: 359 GSESTSMTLQQSAEAMRSQLHELEQLATAMHEMATTSSDVANNAQGAASAAKVADDAAAA 418

Query: 483 GLQLVDSTRQGIDRLAAGMNTAMDEARALEDRSGQIGSVLEVIRTIAEQTNLLALNAAIE 542
           G  +V  T + ID L+A ++ A+D+ + LE  +  I +VL+VI  IA+QTNLLALNAAIE
Sbjct: 419 GTDVVTKTTKAIDTLSATIDAAVDDVKVLESATANIETVLKVINDIADQTNLLALNAAIE 478

Query: 543 AARAGEAGRGFAVVADEVRGLAQRTQVSVEEIRQVIEGLQQGTQDVVGAMHAGQRQAQDS 602
           AARAGE+GRGFAVVADEVR LAQRTQ S  EIR +IE LQ G   V  AM   +  A  +
Sbjct: 479 AARAGESGRGFAVVADEVRTLAQRTQQSTTEIRNMIEKLQSGANAVAVAMSHSKDTAASA 538

Query: 603 AARMEQALPALQRIGEAVAVISDMNLQIASAAEEQSAVAEEVNRNVAGIRDVTESLAGQA 662
             + + A  AL++I  A+  ISDMN+QIASAAEEQS VAEE+N N   I+D+++ +A  A
Sbjct: 539 VNQAQGANEALEKIRLAIQQISDMNIQIASAAEEQSLVAEEINNNTVKIKDLSDQVAESA 598

Query: 663 DESARISQALNRLANQQQALMEQFRV 688
           DE+    Q       +Q A++ +F+V
Sbjct: 599 DEANMSMQIQTENIREQDAILNKFKV 624