Pairwise Alignments

Query, 688 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

Subject, 706 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  415 bits (1067), Expect = e-120
 Identities = 257/712 (36%), Positives = 388/712 (54%), Gaps = 33/712 (4%)

Query: 3   LRRLSIQWKITLLAGLCLLAIVALLVATSLTQAHRSAALVNQANTAMLEDSARQRLQAHA 62
           +R++S+QWKITLLAGLCL+     L+  S+  A  S       ++  + D ++Q LQ  A
Sbjct: 1   MRQISVQWKITLLAGLCLVFTSLALIGFSIYNARASQQTAKLQSSESVIDKSQQLLQTGA 60

Query: 63  ETQALRIQRYFMDAYQYGNGFARLVQVLKDRGGSD------LRAELTRQARASLAGNPDV 116
              A  I  Y  +A       A     LK+    +      LR  L    R S+ G   +
Sbjct: 61  LLNATEISEYLSEAIYRAEMLAANALFLKNNSEENFGESEVLRTSLDEMVRKSVLGFDTI 120

Query: 117 IGLYLVFQPNALDQQDSHYLGQDAMGSNESGRFSLYWSQPSPGTLELE-AMPETMLGDTS 175
            G YLVF+PN LD +DS+Y+  D +GSN+ G+F+ YW++ + G   +   + +  L + S
Sbjct: 121 EGAYLVFRPNMLDSEDSNYVNADYVGSNDIGQFAAYWTKAANGQNVISRVLTQAQLTEES 180

Query: 176 IGSNGAAKNRWLTCPQDTARTCMLEPYLDEVNGRQVLMTSIALPLLEHGKVVGVVGLDIG 235
                  K R++ CP + A  C+  P + E    + L TS+++P+L  G  +G  G+D+ 
Sbjct: 181 ------NKERFV-CPIEQASPCITSPRMVEFETGRYLATSLSVPILIDGVAIGFYGIDLT 233

Query: 236 LANLQQLSVNGRRDLFDGQGQVSIATAAGLLAGNSRDDSVLGKP-----MDKSVADGLLR 290
           LA L  ++     +LFDGQG+VSI +    L  +      LG+      + +S    LL+
Sbjct: 234 LAPLIGITQKSDNNLFDGQGKVSIVSENNALVASDAAFLTLGETFQSENLSRSTVSSLLQ 293

Query: 291 VAHP-------------FTPIP-DTAPWQVVLELPESVLQAPAVALNQRLDAHNQNANLT 336
                            F PI      W ++ E+P   +   A  L+  L    +    +
Sbjct: 294 AGQVNTQWSEDGQWLVVFAPIKVANQNWGIIFEMPRQSVMQDAEQLDILLTEQLERGIRS 353

Query: 337 SLLIGLGTAIAGLLLVWLTARGVTRPILAVAARLEDIASGEGDLTRRLDYAHQDELGQLT 396
            L++G    + GLL+V L A  + RPI AVA RL+DI+SGEGDLT+RL     DE+GQL 
Sbjct: 354 ELMVGTLMVVVGLLVVTLMAMRLVRPIRAVAERLQDISSGEGDLTQRLQVNSADEIGQLA 413

Query: 397 GWFNRFLDKLQPVIAQVKGSLQEARNTADQSAAIASQTSDGMQQQHREIEQVATAANEMS 456
             FN F+DKLQP+I +V  +  +  +T +Q  +    T    + Q +E++ VATAA EM+
Sbjct: 414 QGFNLFMDKLQPIIRRVVDNTGQVVSTTEQVKSTVESTRRSSEAQFKEVDSVATAAEEMT 473

Query: 457 ATALDVAHNASQAAQAARAADQASQEGLQLVDSTRQGIDRLAAGMNTAMDEARALEDRSG 516
            T+  V  NA +A  AA  A +A+Q G +++  ++  +++L   MN A+     L   + 
Sbjct: 474 QTSAHVVENAQRAVNAASDAQRAAQTGDEVIRHSQMQMNQLVDRMNLAVPVVEELARNNT 533

Query: 517 QIGSVLEVIRTIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRGLAQRTQVSVEEIRQ 576
            I  +L VI  I+EQTNLLALNAAIEAARAGE GRGFAVVADEVR LA RTQ SV EIR 
Sbjct: 534 GIIEILSVIEGISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASRTQASVGEIRS 593

Query: 577 VIEGLQQGTQDVVGAMHAGQRQAQDSAARMEQALPALQRIGEAVAVISDMNLQIASAAEE 636
           VI  ++ GTQDVV A+      AQ +A ++  A+  L R+  A+  I++M+ QI  AA++
Sbjct: 594 VINKVELGTQDVVKAIQGSNETAQATAEQVADAVTQLNRVFSAIHAINEMSHQIVQAAQD 653

Query: 637 QSAVAEEVNRNVAGIRDVTESLAGQADESARISQALNRLANQQQALMEQFRV 688
           Q  V+ +V ++V  IRD++  +  + + S ++ + + RL+ +QQ L+ QF+V
Sbjct: 654 QQTVSAQVTQSVVNIRDLSAQILSETEASEKVGEQIARLSFEQQTLVGQFKV 705