Pairwise Alignments

Query, 688 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

Subject, 631 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  254 bits (650), Expect = 7e-72
 Identities = 190/529 (35%), Positives = 271/529 (51%), Gaps = 49/529 (9%)

Query: 186 WLTCPQDTARTCMLEPYLDEVNGRQVLMTSIALPLLEHGKVVGVVGLDIGLANL------ 239
           W        +  +   Y D + G   L+ +IA P+  +G + GVVG D+ +  L      
Sbjct: 126 WYKDAASAGKQIITTAYSDAITG--ALLVTIAEPVRLNGNMSGVVGADVLIDQLIADVIS 183

Query: 240 QQLSVNGRRDLFDGQGQVSIATAAGLLAGNSRDDSVLGKPMD--KSVAD--GLLRVAHP- 294
                N +  L DGQ    +A           D S+L KP+    S  D   + R A+  
Sbjct: 184 MDAGKNAQTMLIDGQNGSFLAHP---------DKSLLLKPVTTLSSALDMRTIERAANQG 234

Query: 295 ---------------FTPIPDTAPWQVVLELPESVLQAPAVALNQRLDAHNQNANLTSLL 339
                          FT +PDT PW   +++      A    L   L         T+LL
Sbjct: 235 ELLALKLNGVEKFFFFTAVPDT-PWYFAVQMDSDTEYASHSELLTGLIT-------TALL 286

Query: 340 IGLGTAIAGLLLVWLTARGVTRPILAVAARLEDIASGEGDLTRRLDYAHQDELGQLTGWF 399
           I   T I  +++ WL +  + R +  V+  LE+IASG+ DLT+RL+    DE+GQL   F
Sbjct: 287 I---TVIVVVIVSWLVSF-LFRDLGRVSKALEEIASGDADLTQRLEPRSDDEVGQLASNF 342

Query: 400 NRFLDKLQPVIAQVKGSLQEARNTADQSAAIASQTSDGMQQQHREIEQVATAANEMSATA 459
           N F+  +  ++ ++          +  +AA A + S  ++ Q  EI  VATA NEM+A  
Sbjct: 343 NTFVSNMHTMVLKLSHVSAALAQQSKVTAAQAEERSSRIRLQQDEINMVATAINEMAAAT 402

Query: 460 LDVAHNASQAAQAARAADQASQEGLQLVDSTRQGIDRLAAGMNTAMDEARALEDRSGQIG 519
            ++A NA   AQ A  A  A   G   V  T++ I  LA  +  A +  + LE    QI 
Sbjct: 403 QEIAGNADHTAQNAGEAVTACVHGAGQVTQTQRSIQSLAEEVQVATEVIQELEAHGHQIS 462

Query: 520 SVLEVIRTIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRGLAQRTQVSVEEIRQVIE 579
           ++L  I+ IAEQTNLLALNAAIEAARAGE GRGFAVVADEVR L+QRT  S +EI+Q+IE
Sbjct: 463 TILSTIQNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLSQRTHASTKEIQQMIE 522

Query: 580 GLQQGTQDVVGAMHAGQRQAQDSAARMEQALPALQRIGEAVAVISDMNLQIASAAEEQSA 639
            LQ  T   VG M   +R A  S     +A  +L++I + V  ISDM  QIASAAEEQ++
Sbjct: 523 TLQATTGKAVGIMDDSRRLADTSVDDANEASVSLEQIHKTVERISDMATQIASAAEEQAS 582

Query: 640 VAEEVNRNVAGIRDVTESLAGQADESARISQALNRLANQQQALMEQFRV 688
           V  E+ RN  GIRDV+  LA +A  +A  +  L+ L+++ +  + +F++
Sbjct: 583 VTSEITRNTVGIRDVSNDLAQEAHSAAEQAAELSELSHELEQEIRRFKL 631