Pairwise Alignments

Query, 433 a.a., component of the Tol biopolymer transport system from Pseudomonas putida KT2440

Subject, 197 a.a., hypothetical protein from Synechococcus elongatus PCC 7942

 Score = 43.9 bits (102), Expect = 4e-09
 Identities = 39/119 (32%), Positives = 56/119 (47%), Gaps = 15/119 (12%)

Query: 167 YVTAERFSTNNTRYTLQRSDYDGARAVTL--LQSREPILSPRFAP------------DGK 212
           Y  ++   + + RY    ++ DG R + L  LQ R+    P FA              G+
Sbjct: 50  YSESQPALSGDGRYLAYVAERDGHRTIYLYDLQRRQLQPLPGFADRDAIAESPSLSWTGR 109

Query: 213 RIAYVSFEQKRPRIFVQNIDTGRREQVT-NFEGLNGAPAWSPDGSRLAFVLSKDGNPDI 270
            IAYV  ++ RP I V +  T RRE +T  + G    P+ SPDG  +AF  S+ G  DI
Sbjct: 110 YIAYVGSDRGRPEIQVYDRATQRREVLTQGWRGWVRQPSISPDGRLVAFESSRRGQWDI 168



 Score = 42.7 bits (99), Expect = 9e-09
 Identities = 36/128 (28%), Positives = 62/128 (48%), Gaps = 5/128 (3%)

Query: 189 GARAVTL-LQSREPILSPRFAPDGKRIAYVSFEQKRPRIFVQNIDTGRREQVTNF---EG 244
           GA  VT  L SR     P  + DG+ +AYV+       I++ ++   + + +  F   + 
Sbjct: 38  GAVVVTPNLNSRYSESQPALSGDGRYLAYVAERDGHRTIYLYDLQRRQLQPLPGFADRDA 97

Query: 245 LNGAPAWSPDGSRLAFVLSKDGNPDIYVMNVASRQISRVTAG-PGINTEPFWGKDGNTLY 303
           +  +P+ S  G  +A+V S  G P+I V + A+++   +T G  G   +P    DG  + 
Sbjct: 98  IAESPSLSWTGRYIAYVGSDRGRPEIQVYDRATQRREVLTQGWRGWVRQPSISPDGRLVA 157

Query: 304 FTSDRGGK 311
           F S R G+
Sbjct: 158 FESSRRGQ 165



 Score = 34.3 bits (77), Expect = 3e-06
 Identities = 31/156 (19%), Positives = 61/156 (39%), Gaps = 8/156 (5%)

Query: 283 VTAGPGINT-----EPFWGKDGNTLYFTSDRGGKPQIYKQSVSGGGAERVTFVGNYNA-- 335
           V   P +N+     +P    DG  L + ++R G   IY   +     + +    + +A  
Sbjct: 40  VVVTPNLNSRYSESQPALSGDGRYLAYVAERDGHRTIYLYDLQRRQLQPLPGFADRDAIA 99

Query: 336 -NPKLSADEKTLVMIHRQQGFTNFKVAAQDLQRGSVKILSETSLDESPTVAPNGTMLIYA 394
            +P LS   + +  +   +G    +V  +  QR  V           P+++P+G ++ + 
Sbjct: 100 ESPSLSWTGRYIAYVGSDRGRPEIQVYDRATQRREVLTQGWRGWVRQPSISPDGRLVAFE 159

Query: 395 TRQQGRGVLMLVSLNGRVRLPLPTAQGEVREPSWSP 430
           + ++G+  + L        L  P    E   P  SP
Sbjct: 160 SSRRGQWDIELFDRGELTELDRPEGSRESSAPIASP 195