Pairwise Alignments

Query, 433 a.a., component of the Tol biopolymer transport system from Pseudomonas putida KT2440

Subject, 275 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score = 62.0 bits (149), Expect = 2e-14
 Identities = 35/99 (35%), Positives = 51/99 (51%)

Query: 251 WSPDGSRLAFVLSKDGNPDIYVMNVASRQISRVTAGPGINTEPFWGKDGNTLYFTSDRGG 310
           WSPDG  LA+   +D   DIY + V   +  R+T G G N  P W  DG  +YF S R G
Sbjct: 116 WSPDGRMLAYCGIRDQVFDIYTIPVDGGEERRLTQGQGRNDGPDWSADGEWIYFNSSRTG 175

Query: 311 KPQIYKQSVSGGGAERVTFVGNYNANPKLSADEKTLVMI 349
           + QI++    G   +R+T     +  P  S D + L+++
Sbjct: 176 RMQIWRVRPDGKDVQRITDSPYGDWFPHPSPDGRHLLVL 214



 Score = 52.0 bits (123), Expect = 2e-11
 Identities = 29/103 (28%), Positives = 47/103 (45%)

Query: 207 FAPDGKRIAYVSFEQKRPRIFVQNIDTGRREQVTNFEGLNGAPAWSPDGSRLAFVLSKDG 266
           ++PDG+ +AY     +   I+   +D G   ++T  +G N  P WS DG  + F  S+ G
Sbjct: 116 WSPDGRMLAYCGIRDQVFDIYTIPVDGGEERRLTQGQGRNDGPDWSADGEWIYFNSSRTG 175

Query: 267 NPDIYVMNVASRQISRVTAGPGINTEPFWGKDGNTLYFTSDRG 309
              I+ +    + + R+T  P  +  P    DG  L   S  G
Sbjct: 176 RMQIWRVRPDGKDVQRITDSPYGDWFPHPSPDGRHLLVLSYDG 218



 Score = 37.0 bits (84), Expect = 7e-07
 Identities = 64/268 (23%), Positives = 92/268 (34%), Gaps = 68/268 (25%)

Query: 223 RPRIFVQNIDTGRREQVTNFEGLNGAPAWSPDGSRLAFVLSKDGNPDIYVMNVASRQISR 282
           R  + + +I TG    V   E L  AP WSPDG  L  +++ DG   +Y +       + 
Sbjct: 2   RSSVEIFDIATGETRVVWQTERLVEAPNWSPDGKFL--IINGDGR--LYRLGFDGSDPTE 57

Query: 283 VTAG--PGINTEPFWGKDGNTL-------------YFTSDRGGKPQ-------------- 313
           +  G     N +     DG+TL             Y     GG P+              
Sbjct: 58  IDTGFARHCNNDHGISPDGSTLVISDKTEFGSSAIYLLPAEGGTPRLVTRNLPSYWHGWS 117

Query: 314 -----------------IYKQSVSGGGAERVTFVGNYNANPKLSADEKTLVMIHRQQG-- 354
                            IY   V GG   R+T     N  P  SAD + +     + G  
Sbjct: 118 PDGRMLAYCGIRDQVFDIYTIPVDGGEERRLTQGQGRNDGPDWSADGEWIYFNSSRTGRM 177

Query: 355 -FTNFKVAAQDLQRGSVKILSETSLDESPTVAPNGTMLIYATR-----QQGRGVLMLVSL 408
                +   +D+QR    I      D  P  +P+G  L+  +         R + + + L
Sbjct: 178 QIWRVRPDGKDVQR----ITDSPYGDWFPHPSPDGRHLLVLSYDGDVFDHPRDLDVRLRL 233

Query: 409 ------NGRVRLPLPTAQGEVREPSWSP 430
                 N RV L L   QG V  P+WSP
Sbjct: 234 MDPDGGNARVLLELFGGQGTVNVPNWSP 261



 Score = 28.1 bits (61), Expect = 3e-04
 Identities = 26/99 (26%), Positives = 39/99 (39%), Gaps = 11/99 (11%)

Query: 174 STNNTRYTLQRSDYDGARAVTLLQSREPILSPRFAPDGKRIAYVS-----FEQKRP---R 225
           S+   R  + R   DG     +  S      P  +PDG+ +  +S     F+  R    R
Sbjct: 171 SSRTGRMQIWRVRPDGKDVQRITDSPYGDWFPHPSPDGRHLLVLSYDGDVFDHPRDLDVR 230

Query: 226 IFVQNIDTGRREQVTNFEGLNGA---PAWSPDGSRLAFV 261
           + + + D G    +    G  G    P WSP G+  AFV
Sbjct: 231 LRLMDPDGGNARVLLELFGGQGTVNVPNWSPSGTAFAFV 269



 Score = 26.6 bits (57), Expect = 0.001
 Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 1/80 (1%)

Query: 188 DGARAVTLLQSREPILSPRFAPDGKRIAYVSFEQKRPRIFVQNIDTGRREQVTNFEGLNG 247
           DG     L Q +     P ++ DG+ I + S    R +I+    D    +++T+    + 
Sbjct: 141 DGGEERRLTQGQGRNDGPDWSADGEWIYFNSSRTGRMQIWRVRPDGKDVQRITDSPYGDW 200

Query: 248 APAWSPDGSRLAFVLSKDGN 267
            P  SPDG  L  VLS DG+
Sbjct: 201 FPHPSPDGRHL-LVLSYDGD 219