Pairwise Alignments

Query, 433 a.a., component of the Tol biopolymer transport system from Pseudomonas putida KT2440

Subject, 441 a.a., TolB domain-containing protein (RefSeq) from Shewanella loihica PV-4

 Score =  339 bits (869), Expect = 1e-97
 Identities = 179/426 (42%), Positives = 271/426 (63%), Gaps = 26/426 (6%)

Query: 25  NILVTSGSDRATPIAVVPFGLQGGSVLPEDIADIIGNDLRNSGYYSP-----IPRQNMIS 79
           +I++T G D A PIAVVPF  QG + +P+ I+D++ +DL  SG + P     +P++N+ S
Sbjct: 24  DIVITEGVDAARPIAVVPFVWQGSTPMPQQISDVVMSDLTRSGTFKPMDELGLPQRNLGS 83

Query: 80  QPSQASEVIFRDWKALGAQYVMVGSIVPSG-GRLQVQYALFNVATEQQVLTGSVAGS--- 135
                +++  + W  + A+ V++G++ P G  +  V + L ++   Q    G  + S   
Sbjct: 84  ----LAQMDLKAWSNVAAEAVVMGTVKPYGPDQYLVNFELIDLVKAQMQSGGPQSASEYL 139

Query: 136 ---------TDQLRDMAHYIADQSFEKLTGIKGAFSTRMLYVTAERFSTNNTRYTLQRSD 186
                    + Q R   H I+D  +EKLTGI+GAF TR+ YV  +  +   + Y L  +D
Sbjct: 140 LDSRETVISSAQFRQYGHRISDIVYEKLTGIRGAFLTRIAYVVVDHKA--KSPYKLMIAD 197

Query: 187 YDGARAVTLLQSREPILSPRFAPDGKRIAYVSFEQKRPRIFVQNIDTGRREQVTNFEGLN 246
           YDG     LL+S EP++SP ++PDG+R+AYVSFE K+  +FVQ+I T +R +VT+F G+N
Sbjct: 198 YDGYNEQMLLRSPEPLMSPAWSPDGRRLAYVSFENKQAEVFVQDIYTQQRTKVTSFPGIN 257

Query: 247 GAPAWSPDGSRLAFVLSKDGNPDIYVMNVASRQISRVTAGPGINTEPFWGKDGNTLYFTS 306
           GAP +SPDG +LA  LSKDG P+IYV ++A++ I RVT    I+TE  W  DG +L FTS
Sbjct: 258 GAPTFSPDGKKLALTLSKDGQPEIYVADIATKAIKRVTNHYAIDTEASWTPDGKSLIFTS 317

Query: 307 DRGGKPQIYKQSVSGGGAERVTFVGNYNANPKLSADEKTLVMIHRQQGFTNFKVAAQDLQ 366
           +RGG+PQIY+ +++ G   R+TF G +N    +S D +++V ++R  G   F +A  DL+
Sbjct: 318 ERGGRPQIYQVALASGKVTRLTFEGEWNLGGSISPDGRSMVFVNRTNG--KFNIARMDLE 375

Query: 367 RGSVKILSETSLDESPTVAPNGTMLIYATRQQGRGVLMLVSLNGRVRLPLPTAQGEVREP 426
              +++L+ T LDESP++APNGTM+IY T  QG+ VL  VS++GR +  LP  QGEV+ P
Sbjct: 376 TRFMQVLTTTRLDESPSIAPNGTMVIYGTTYQGQQVLAAVSMDGRFKARLPVGQGEVKSP 435

Query: 427 SWSPYL 432
           +WSP+L
Sbjct: 436 AWSPFL 441