Pairwise Alignments

Query, 348 a.a., Holliday junction ATP-dependent DNA helicase RuvB from Pseudomonas putida KT2440

Subject, 334 a.a., Holliday junction branch migration DNA helicase RuvB from Vibrio cholerae E7946 ATCC 55056

 Score =  484 bits (1246), Expect = e-141
 Identities = 244/332 (73%), Positives = 283/332 (85%), Gaps = 2/332 (0%)

Query: 1   MIEADRLIAASGRD--REEVQDRAIRPLSLDEYIGQPVVREQMALFIQAARGRGESLDHT 58
           MIEADRLIA        EEV DRAIRP  L +Y GQ  VR+QM +FIQAA+ R E+LDH 
Sbjct: 1   MIEADRLIAPISNHFKDEEVIDRAIRPKKLADYQGQDHVRDQMEIFIQAAQMRQEALDHL 60

Query: 59  LIFGPPGLGKTTLANIIAHEMGVSVKSTSGPILERPGDLAAMLTNLEPHDVLFIDEIHRL 118
           LIFGPPGLGKTTLANI+A+EMGV++++TSGP+LE+ GDLAA+LTNLE +DVLFIDEIHRL
Sbjct: 61  LIFGPPGLGKTTLANIVANEMGVNIRTTSGPVLEKAGDLAALLTNLEENDVLFIDEIHRL 120

Query: 119 SPVVEEVLYPAMEDFQLDIMIGEGPAARSIKLDLPPFTLVGATTRAGMLTNPLRDRFGIV 178
           SP+VEEVLYPAMED+QLDIMIGEGPAARSIK+DLPPFTL+GATTRAG LT+PLRDRFGIV
Sbjct: 121 SPMVEEVLYPAMEDYQLDIMIGEGPAARSIKIDLPPFTLIGATTRAGSLTSPLRDRFGIV 180

Query: 179 QRLEFYNDKDLSTIVSRSANILGLAIEDQGAYEIARRARGTPRIANRLLRRVRDYAEVRG 238
           QRLE+Y   DL  IV RSA  LGL+++ +GA E+ARRARGTPRIANRLLRRVRDYAEV+G
Sbjct: 181 QRLEYYKVADLQHIVQRSAQCLGLSMDSEGALEVARRARGTPRIANRLLRRVRDYAEVKG 240

Query: 239 KGQITKAVADMALNLLDVDERGFDHSDRRLLLTMIEKFDGGPVGVDNLAAAISEERHTIE 298
            G I    AD ALN+LDVD +GFD+ DR+LLL ++EKF GGPVG+DNLAAAI EE+ TIE
Sbjct: 241 DGHICAQTADRALNMLDVDHQGFDYMDRKLLLAIMEKFSGGPVGIDNLAAAIGEEKDTIE 300

Query: 299 DVLEPYLIQQGYIMRTPRGRVVTRHAYLHFGL 330
           DVLEP+LIQQGY+ RTPRGR+ T  AYLHFG+
Sbjct: 301 DVLEPFLIQQGYLQRTPRGRIATDRAYLHFGI 332