Pairwise Alignments

Query, 348 a.a., Holliday junction ATP-dependent DNA helicase RuvB from Pseudomonas putida KT2440

Subject, 361 a.a., Holliday junction branch migration DNA helicase RuvB from Synechocystis sp000284455 PCC 6803

 Score =  351 bits (901), Expect = e-101
 Identities = 178/317 (56%), Positives = 234/317 (73%)

Query: 17  EVQDRAIRPLSLDEYIGQPVVREQMALFIQAARGRGESLDHTLIFGPPGLGKTTLANIIA 76
           E Q+ ++RP  L +YIGQ  ++E + + IQAA+GR E++DH L++GPPGLGKTTLA I+A
Sbjct: 36  EQQEASLRPQRLADYIGQRDLKEVLRIAIQAAQGRQEAIDHLLLYGPPGLGKTTLALILA 95

Query: 77  HEMGVSVKSTSGPILERPGDLAAMLTNLEPHDVLFIDEIHRLSPVVEEVLYPAMEDFQLD 136
            EM V  K T+ P LERP D+  +L  L+P D+LFIDEIHRL+ + EE+LYPAMEDF+LD
Sbjct: 96  EEMQVRCKITAAPALERPRDITGLLLALQPGDILFIDEIHRLNRLTEELLYPAMEDFRLD 155

Query: 137 IMIGEGPAARSIKLDLPPFTLVGATTRAGMLTNPLRDRFGIVQRLEFYNDKDLSTIVSRS 196
           I +G+G +A+   L L  FTLVGATT+ G LT+PLRDRFG++QRL FY   +L  I+ R+
Sbjct: 156 ITMGKGQSAKVRSLKLAHFTLVGATTKVGSLTSPLRDRFGLIQRLRFYEVDELQQIILRT 215

Query: 197 ANILGLAIEDQGAYEIARRARGTPRIANRLLRRVRDYAEVRGKGQITKAVADMALNLLDV 256
           A IL ++I   GA  IA RARGTPRIANRLL+RVRDYA+V+ + +I  A+A  AL+L  V
Sbjct: 216 AGILSVSISPTGAEAIAMRARGTPRIANRLLKRVRDYAQVKQQPEIDPALASEALDLYQV 275

Query: 257 DERGFDHSDRRLLLTMIEKFDGGPVGVDNLAAAISEERHTIEDVLEPYLIQQGYIMRTPR 316
           D+RG D +DR +L T+IE+F GGP G++ +AAA  E+  TIE+V EPYL+Q GY+ RT R
Sbjct: 276 DKRGLDWTDRLVLQTLIEQFQGGPTGLEAIAAATGEDAKTIEEVYEPYLLQIGYLARTSR 335

Query: 317 GRVVTRHAYLHFGLNIP 333
           GR+ T  AY H GL  P
Sbjct: 336 GRIATTAAYEHLGLTPP 352