Pairwise Alignments

Query, 348 a.a., Holliday junction ATP-dependent DNA helicase RuvB from Pseudomonas putida KT2440

Subject, 442 a.a., recombination factor protein RarA (RefSeq) from Shewanella amazonensis SB2B

 Score = 53.1 bits (126), Expect = 1e-11
 Identities = 36/118 (30%), Positives = 60/118 (50%), Gaps = 12/118 (10%)

Query: 23  IRPLSLDEYIGQP-VVREQMALFIQAARGRGESLDHTLIFGPPGLGKTTLANIIAHEMGV 81
           +RP S++EYIGQ  ++ E   L      G+  S+   L++GPPG GKTTLA ++A     
Sbjct: 18  MRPASVEEYIGQSHLLGEGKPLRQALLAGKVHSM---LLWGPPGTGKTTLAELVARYANA 74

Query: 82  SVKSTSGPILERPGDLAAMLTNLE-------PHDVLFIDEIHRLSPVVEEVLYPAMED 132
            V+  S  +     ++ A +   +          +LF+DE+HR +   ++   P +ED
Sbjct: 75  HVERISA-VTSGVKEIRAAIEQAKNVAQSRGQRTLLFVDEVHRFNKSQQDAFLPFIED 131