Pairwise Alignments

Query, 348 a.a., Holliday junction ATP-dependent DNA helicase RuvB from Pseudomonas putida KT2440

Subject, 349 a.a., holliday junction ATP-dependent DNA helicase RuvB from Phaeobacter inhibens DSM 17395

 Score =  397 bits (1019), Expect = e-115
 Identities = 201/340 (59%), Positives = 253/340 (74%), Gaps = 2/340 (0%)

Query: 1   MIEADRLIAASG--RDREEVQDRAIRPLSLDEYIGQPVVREQMALFIQAARGRGESLDHT 58
           MI+AD  +  +    D     DRA+RP  L E+IGQ   R  + +FI++AR RGE++DHT
Sbjct: 7   MIDADPTLRPTPLPEDSAAENDRALRPQGLGEFIGQAEARANLRVFIESARRRGEAMDHT 66

Query: 59  LIFGPPGLGKTTLANIIAHEMGVSVKSTSGPILERPGDLAAMLTNLEPHDVLFIDEIHRL 118
           L  GPPGLGKTTLA I+A E+GV+ + TSGP+L + GDLAA+LTNLE  DVLFIDEIHRL
Sbjct: 67  LFHGPPGLGKTTLAQIVARELGVNFRMTSGPVLAKAGDLAAILTNLESRDVLFIDEIHRL 126

Query: 119 SPVVEEVLYPAMEDFQLDIMIGEGPAARSIKLDLPPFTLVGATTRAGMLTNPLRDRFGIV 178
           +P VEEVLYPAMEDF+LD++IGEGPAAR+++++L PFTLVGATTR G+LT PLRDRFGI 
Sbjct: 127 NPAVEEVLYPAMEDFELDLVIGEGPAARTVRIELQPFTLVGATTRMGLLTTPLRDRFGIP 186

Query: 179 QRLEFYNDKDLSTIVSRSANILGLAIEDQGAYEIARRARGTPRIANRLLRRVRDYAEVRG 238
            RL+FY   +L  IVSR+A  LG   +D GA EIARRARGTPRIA RLLRRV D+A V G
Sbjct: 187 TRLQFYTVDELFEIVSRNARKLGAPADDDGAREIARRARGTPRIAGRLLRRVVDFAVVEG 246

Query: 239 KGQITKAVADMALNLLDVDERGFDHSDRRLLLTMIEKFDGGPVGVDNLAAAISEERHTIE 298
            G IT+ +AD AL  L VD+ G D +DRR L  + E + GGPVG++ ++AA+SE R  +E
Sbjct: 247 DGTITRELADGALTRLGVDQLGLDGADRRYLRMVAENYGGGPVGIETMSAALSESRDALE 306

Query: 299 DVLEPYLIQQGYIMRTPRGRVVTRHAYLHFGLNIPGRLGE 338
           +V+EPYL+QQG I RTPRGR++   A+ H GL  P   G+
Sbjct: 307 EVIEPYLLQQGLIQRTPRGRMLAHKAWTHLGLTPPRGQGD 346