Pairwise Alignments

Query, 348 a.a., Holliday junction ATP-dependent DNA helicase RuvB from Pseudomonas putida KT2440

Subject, 432 a.a., AAA ATPase from Dechlorosoma suillum PS

 Score = 48.1 bits (113), Expect = 4e-10
 Identities = 61/250 (24%), Positives = 104/250 (41%), Gaps = 36/250 (14%)

Query: 23  IRPLSLDEYIGQP-VVREQMALFIQAARGRGESLDHTLIFGPPGLGKTTLANIIAHEMGV 81
           +RP + DE IGQ  ++     L +    G+  S+   +++GPPG+GKTTLA ++A +   
Sbjct: 11  LRPRAPDEVIGQQHLLGPGKPLRLAFESGQPHSM---ILWGPPGVGKTTLARMMATQFNC 67

Query: 82  SVKSTSGPI-----LERPGDLAAMLTNLEPHDVLFIDEIHRLSPVVEEVLYPAMEDFQLD 136
              + S        +      A M        +LF+DEIHR +   ++   P +E     
Sbjct: 68  EFIALSAVFSGIKEVREAVAQAEMWKAQGKRTILFVDEIHRFNKAQQDGFLPFVES---- 123

Query: 137 IMIGEGPAARSIKLDLPPFTLVGATTR--AGMLTNPLRDRFGIVQRLEFYNDKDLSTIVS 194
                             FT +GATT   +  + + L  R   V  L+  ++ ++  +  
Sbjct: 124 ----------------GLFTFIGATTENPSFEVNSALLSR-ASVYVLKSLDEAEMGQLFD 166

Query: 195 RSAN--ILGLAIEDQGAYEIARRARGTPRIANRLLRRVRDYAEVRGKGQITKAV--ADMA 250
           R+ +  +  L  +D+    +   A G  R    LL +VR  A      ++  A   A MA
Sbjct: 167 RARDKALAELDFDDEARTRLIGLADGDARRFLNLLEQVRTAARTARLAKVDGAFIEATMA 226

Query: 251 LNLLDVDERG 260
            +L   D+ G
Sbjct: 227 QSLRRFDKGG 236