Pairwise Alignments

Query, 354 a.a., DNA polymerase IV from Pseudomonas putida KT2440

Subject, 430 a.a., DNA polymerase IV from Sinorhizobium meliloti 1021

 Score =  214 bits (544), Expect = 4e-60
 Identities = 130/341 (38%), Positives = 189/341 (55%), Gaps = 19/341 (5%)

Query: 6   IIHVDCDCFYAAIEMRDDPRLAGRPMAVGGSPDHRGVIATCNYEARAYGVRSAMSSRHAL 65
           + H+DCD FYA++E RD+P LA +P+ +GG    RGV++T  Y AR +GVRSAM    AL
Sbjct: 45  LAHIDCDAFYASVEKRDNPELADKPVIIGGGK--RGVVSTACYIARIHGVRSAMPMFKAL 102

Query: 66  KLCPDLLIVKPRFEAYREASREIHTIFRDYTELIEPLSLDEAYLDVSDSQ-WYSGSATRI 124
           + CP  +++KP  E Y    RE+  + ++ T L++PLS+DEA+LD+S ++  +     R 
Sbjct: 103 EACPQAVVIKPDMEKYVRVGREVRAMMQELTPLVQPLSIDEAFLDLSGTERLHHDPPART 162

Query: 125 AEDIRRRVARTLHITVSAGVAPNKFLAKIASDWRKPNGLFVITPNEVETFVAALPVARLH 184
                +RV + + ITVS G++  KFLAK+ASD +KP G  VI   E   F+ A PV  + 
Sbjct: 163 LARFAKRVEQEIGITVSVGLSYCKFLAKVASDLQKPRGFSVIGQAEAADFLKAKPVTLIW 222

Query: 185 GVGKVTADKLTRLGIETCLHLREWSRLALVREFGSFGERLWGLARGIDERAVHNDSRRQS 244
           GVGK  A  L R GI     L+      L+R +G+ G RL+ L+RG+DER+V  D   +S
Sbjct: 223 GVGKAFAATLERDGIRAIGQLQTMEEADLMRRYGTMGRRLYRLSRGLDERSVEIDGEAKS 282

Query: 245 VSVENTYDTDLPDLASCLARLPELLDSLNERIARMDSSYRPDKPFVKVKFHDFSQTTMEQ 304
           VS E T++ DL      +A L  L + +  R+ +  S+       +K+K  DF   T   
Sbjct: 283 VSSETTFNDDLARQEDLVAHLRGLSEQVAFRLRK--SALAGQTVVLKLKTADFKTRT--- 337

Query: 305 AGAGRDLESYRQLLGQAFARG---------GKPVRLLGVGV 336
               R LES  +L  + F  G         G   RL+G+GV
Sbjct: 338 --RNRRLESPTRLADRIFRTGLQLLEKEVDGTKYRLIGIGV 376