Pairwise Alignments

Query, 354 a.a., DNA polymerase IV from Pseudomonas putida KT2440

Subject, 369 a.a., DNA polymerase IV from Sinorhizobium meliloti 1021

 Score =  276 bits (706), Expect = 6e-79
 Identities = 158/337 (46%), Positives = 209/337 (62%), Gaps = 8/337 (2%)

Query: 3   LRKIIHVDCDCFYAAIEMRDDPRLAGRPMAVGGSPDHRGVIATCNYEARAYGVRSAMSSR 62
           +RKIIH+D D FYA++E RD+P L G+P+AVG  P+ RGV+A  +YEAR +GV SAM S 
Sbjct: 16  VRKIIHIDMDAFYASVEQRDNPELRGKPVAVG-YPEARGVVAAASYEARKFGVHSAMPSV 74

Query: 63  HALKLCPDLLIVKPRFEAYREASREIHTIFRDYTELIEPLSLDEAYLDVSDSQWYSGSAT 122
            A + CP+L+ V  RF+ YR  SR+I  IF +YT L+EPLSLDEAYLDV+++      AT
Sbjct: 75  TAKRKCPELIFVPHRFDVYRAVSRQIQAIFAEYTPLVEPLSLDEAYLDVTENFRGLKLAT 134

Query: 123 RIAEDIRRRVARTLHITVSAGVAPNKFLAKIASDWRKPNGLFVITPNEVETFVAALPVAR 182
            IAE+IR R+    H+T SAGV+ NKFLAK+ASD RKP+GLFVITP     FV ALPV +
Sbjct: 135 EIAEEIRGRIRAETHLTASAGVSYNKFLAKMASDQRKPDGLFVITPKHGPDFVQALPVKK 194

Query: 183 LHGVGKVTADKLTRLGIETCLHLREWSRLALVREFGSFGERLWGLARGIDERAVHNDSRR 242
            HGVG  TA+K+ RLGIET   L+      L + FG  G   + +ARGIDER V  D  R
Sbjct: 195 FHGVGPATAEKMKRLGIETGADLKSRDLAFLQQHFGKSGPYFYWIARGIDERKVKPDRIR 254

Query: 243 QSVSVENTYDTDLPDLASCLARLPELLDSLNERIARMDSSYRPDKPFVKVKFHDFSQTTM 302
           +S+  E+T+  D+ DL +  A L  L+D +        S  R     +KVK+ DF+Q T 
Sbjct: 255 KSIGAEDTFREDVHDLETARAGLKPLIDKVWHYCEA--SGIRGKTMTLKVKWADFTQITR 312

Query: 303 EQA-----GAGRDLESYRQLLGQAFARGGKPVRLLGV 334
            +       +  ++    +LL        K +RLLGV
Sbjct: 313 SKTIVAPIASVAEMSEIAELLLSPIFPAPKGIRLLGV 349