Pairwise Alignments

Query, 354 a.a., DNA polymerase IV from Pseudomonas putida KT2440

Subject, 351 a.a., DNA polymerase IV from Klebsiella michiganensis M5al

 Score =  313 bits (801), Expect = 6e-90
 Identities = 168/340 (49%), Positives = 224/340 (65%), Gaps = 2/340 (0%)

Query: 3   LRKIIHVDCDCFYAAIEMRDDPRLAGRPMAVGGSPDHRGVIATCNYEARAYGVRSAMSSR 62
           +RKIIHVD DCF+AA+EMRD+P L   P+A+GGS   RGVI+T NY AR +GVRSAM + 
Sbjct: 1   MRKIIHVDMDCFFAAVEMRDNPALRDIPIAIGGSRVQRGVISTANYPARKFGVRSAMPTA 60

Query: 63  HALKLCPDLLIVKPRFEAYREASREIHTIFRDYTELIEPLSLDEAYLDVSDSQWYSGSAT 122
            ALKLCP L ++  RF+AY+EAS  I  IF  YT LIEPLSLDEAYLDVSDS    GSAT
Sbjct: 61  TALKLCPHLTLLPGRFDAYKEASNHIREIFSRYTSLIEPLSLDEAYLDVSDSVHCQGSAT 120

Query: 123 RIAEDIRRRVARTLHITVSAGVAPNKFLAKIASDWRKPNGLFVITPNEVETFVAALPVAR 182
            +A++IR  + R L++T SAG+AP KFLAKIASD  KPNG FVI P++V  FV  LP+A+
Sbjct: 121 LMAQEIRETIHRELNLTASAGIAPVKFLAKIASDLNKPNGQFVIAPHQVAEFVKTLPLAK 180

Query: 183 LHGVGKVTADKLTRLGIETCLHLREWSRLALVREFGSFGERLWGLARGIDERAVHNDSRR 242
           + GVGKV+A KL  +G+ TC  ++      L++ FG FG  LW  ++GIDER + ++ +R
Sbjct: 181 IPGVGKVSAAKLESMGLRTCADVQNSDLAMLLKRFGKFGRILWERSQGIDEREISSERQR 240

Query: 243 QSVSVENTYDTDLPDLASCLARLPELLDSLNERIARMDSSYRPDKPFVKVKFHDFSQTTM 302
           +SV VE T   D+ + A C + +  L   L  R+A++       +  VK+KF+DF  TT 
Sbjct: 241 KSVGVERTLVEDIHEWAECESIIENLYPELERRLAKVKPDLLIARQGVKLKFNDFQLTTQ 300

Query: 303 EQAGAGRDLESYRQLLGQAF--ARGGKPVRLLGVGVRLRD 340
           E      + +       +A+   RGG+ VRL+G+ V L D
Sbjct: 301 EHVWPRLNKDDLITTAHKAWNERRGGRGVRLVGLHVTLLD 340