Pairwise Alignments

Query, 535 a.a., Sensor histidine kinase from Pseudomonas putida KT2440

Subject, 412 a.a., integral membrane sensor signal transduction histidine kinase (RefSeq) from Shewanella loihica PV-4

 Score =  147 bits (370), Expect = 1e-39
 Identities = 101/318 (31%), Positives = 160/318 (50%), Gaps = 18/318 (5%)

Query: 218 VLEIGPLYQ--LNPYPPQLLILIAFLGLCLIGLVVYLLVRQLERRVSGLEIAATRIAQGS 275
           V+  GP+ +      P +L+I   +  L   G +  LL+  L R +S L+ +A       
Sbjct: 110 VIAFGPVLRKPTQAVPTELIIFALYASL---GCLALLLIWPLFRDLSQLQASAVEFGANP 166

Query: 276 LDTRVPAGDADSVGRLAAAFNGMAEHLQRSLTMQRELVRAVSHELRTPVARLRFGLEMIE 335
                      ++  LA  F+ +   +   L M +EL R +SHE+RTP+AR+RF L++ +
Sbjct: 167 RKMEQTINKRSAIYPLAKVFHEVTVQIVDFLQMHKELSRTISHEVRTPLARMRFALQLSK 226

Query: 336 SATTEQVRAKHLAGMDGDIQDLDKLVDEMLTYARLEQGAPALKFQRVDLDALLDRVIEEL 395
           +   E    K+   ++ DI ++++L +  L++A+LE     +K + V   A LD + E+ 
Sbjct: 227 AELDE----KYWQRLNADIDEIEQLANNYLSFAKLEHREAQIKKEAVSTQAFLDELEEKF 282

Query: 396 APLRAEVRVVRGDCQGADAEGAWVEAEPRYLHRALQNLVGNAMRHAEGEVRLSYQLGQQR 455
           A  + ++    G    AD   A  +A    +  A QNL+ NA+R A+  +++ ++     
Sbjct: 283 ALYQDKI----GITFIADDRLAVFDASSMSI--ATQNLIMNALRFAKQNIQVRFRCEDDL 336

Query: 456 CRIDVEDDGPGIPEGFWDRIFTPFTRLDDSRTRASGGHGLGLSIVRRIIYWHAGRATVGR 515
           CRI VEDDGPG  EG   ++   F R  D       G+GLGL I R+I  WH GR  V +
Sbjct: 337 CRITVEDDGPGF-EGKGKQLLAAFAR--DKEQSDGSGYGLGLYIARKIAIWHQGRLEVAK 393

Query: 516 SEALGGACFSLNWPRQQA 533
           SE LGGA  +L W  Q A
Sbjct: 394 SEELGGASLTLVWRNQPA 411