Pairwise Alignments

Query, 535 a.a., Sensor histidine kinase from Pseudomonas putida KT2440

Subject, 639 a.a., cache domain-containing protein from Methanococcus maripaludis S2

 Score =  119 bits (298), Expect = 3e-31
 Identities = 92/319 (28%), Positives = 156/319 (48%), Gaps = 31/319 (9%)

Query: 237 LIAFLGLCLIGLVVYLLVRQLERRVSGLEIAATRIAQGSLDTRVPAGDADSVGRLAAAFN 296
           ++  +GL +  +V YL+ R + + +  L+  A  ++ G  D +V     D  G LA AFN
Sbjct: 320 VVGLIGLLIALIVSYLINRGIIKPLEQLKQGAEWVSNGRYDQKVIVDSDDEFGELAKAFN 379

Query: 297 GMA--------------EHLQRSLT-------MQRELVRAVSHELRTPVARLRFGLEMIE 335
            MA              E L+ S         ++ EL+  VSHELRTP+  ++  +E++ 
Sbjct: 380 KMATQINISDDKLKKHAEELKISYNELKELDKLKSELIAVVSHELRTPLTSIKGYVELVL 439

Query: 336 SATTEQV---RAKHLAGMDGDIQDLDKLVDEMLTYARLEQGAPALKFQRVDLDALLDRVI 392
             T   +   + K L   D +I  L +L++ ML  +++E+G   +  ++V+L +++  VI
Sbjct: 440 DGTMGAINDSQKKCLQVADDNIVRLRRLIESMLDLSKIERGELEMYREKVNLRSIVCDVI 499

Query: 393 EELAPLRAEVRVVRGDCQGADAEGAWVEAEPRYLHRALQNLVGNAMRH--AEGEVRLSYQ 450
           E L PL  E  +        + E   +EA+   + + L NL+ NA++   A   + +S  
Sbjct: 500 EYLKPLATEKNIKLNK----EVEDIAIEADKDRITQVLTNLIENAIKFSPANESILVSGV 555

Query: 451 LGQQRCRIDVEDDGPGIPEGFWDRIFTPFTRLDDSRTRASGGHGLGLSIVRRIIYWHAGR 510
           L  +   + V D G GIP+   ++IF  F ++D S  R  GG GLGL++ + I+  H G 
Sbjct: 556 LEDEHIHLKVTDRGAGIPKKDMEKIFNRFYQVDSSTKRKKGGSGLGLAVCKSIVEAHKGS 615

Query: 511 ATVGRSEALGGACFSLNWP 529
             V  SE   G+ F +  P
Sbjct: 616 IWV-ESELGKGSTFHIILP 633