Pairwise Alignments

Query, 232 a.a., DNA-binding response regulator from Pseudomonas putida KT2440

Subject, 241 a.a., chemotaxis protein CheY from Pseudomonas fluorescens FW300-N2E3

 Score =  332 bits (852), Expect = 3e-96
 Identities = 168/229 (73%), Positives = 195/229 (85%), Gaps = 4/229 (1%)

Query: 7   RILIVEDDQRLAELTAEYLQANGFEVAVEADGARAARRIIDSQPDLVILDLMLPGEDGLS 66
           ++LIVEDDQRLAELT EYL+++G  V +E +GA AA RII  QPDLVILDLMLPGEDGL+
Sbjct: 7   QVLIVEDDQRLAELTREYLESHGLRVTLEGNGALAAARIIAEQPDLVILDLMLPGEDGLT 66

Query: 67  ICRRVRSQYQGPILMLTARSDELDQVQGLDLGADDYVCKPVRPRLLLARIQALLRRSETV 126
           ICR+VR  Y GPILMLTAR+D++DQ+QGLD+GADDYVCKPVRPRLLLAR+QALLRRSE  
Sbjct: 67  ICRKVRDHYDGPILMLTARTDDMDQIQGLDMGADDYVCKPVRPRLLLARVQALLRRSEAP 126

Query: 127 D----SKRQDLAFGALRIDNRLREARLGEQLIELTGAEFDLLWLLASNAGRVLTREQIFT 182
           +     K + L FG L +DN LREA L +  IELT AEFDLLWLL +NAGR+L+RE+IFT
Sbjct: 127 EPAAPEKLRRLQFGPLVVDNALREAWLQDTGIELTSAEFDLLWLLVANAGRILSREEIFT 186

Query: 183 ALRGVGYDGQDRSIDIRISKIRPKIGDDPLQPRLIKTLRSKGYLFVGEA 231
           ALRG+GYDGQDRSID+RIS+IRPKIGDDP  PRLIKT+RSKGYLFV EA
Sbjct: 187 ALRGIGYDGQDRSIDVRISRIRPKIGDDPDHPRLIKTIRSKGYLFVPEA 235