Pairwise Alignments

Query, 959 a.a., Ribonucleoside-diphosphate reductase subunit alpha from Pseudomonas putida KT2440

Subject, 1231 a.a., Ribonucleoside-diphosphate reductase (NCBI) from Rhodospirillum rubrum S1H

 Score = 61.2 bits (147), Expect = 4e-13
 Identities = 80/374 (21%), Positives = 137/374 (36%), Gaps = 55/374 (14%)

Query: 482 NTANWIPDLFMKRVFDDGKWTLFSPSEVPDLHDLTGKAFEERYEYYEALTEYNKIKVFKT 541
           N +  + D F+++V  DG WTL         H ++ K                     +T
Sbjct: 399 NNSVRVTDAFLQQVERDGAWTL--------RHRMSEKT--------------------RT 430

Query: 542 VQAKDLWRKMLSMLFETGHPWLTFKDPCNLRSPQQHVGVVHSSNLCTEITLNTNKDEIAV 601
           V+A+ LW ++    + +  P L F    N        G +++SN C+E       D+ A 
Sbjct: 431 VKARTLWDEIAFAAWASADPGLQFDTTINDWHTCPESGRINASNPCSEYMF---LDDTA- 486

Query: 602 CNLGSINLPNHIVDGK----LDTTKLQRTVNTAVRMLDNVIDINYYSVPQARNSNFKHRP 657
           CNL S+NL      G      D             +L+  + +  +   +    ++K R 
Sbjct: 487 CNLASLNLITFRGQGAEAGLFDAVGFAHACRLWTVVLEISVLMAQFPSREIAERSYKFRT 546

Query: 658 VGLGIMGFQDALYLQHIPYGSDAAVEFADKSMEAVSYYAIQASCDLADERGAYETFQGSL 717
           +GLG       L    +PY SDA           ++  A   S ++A++ GA+  F  + 
Sbjct: 547 LGLGYANIGGLLMANGLPYDSDAGRALCGALSAIMTGVAYATSAEMAEQMGAFPGFAINR 606

Query: 718 ----------------WSKGILPLDSQQILIEARGQKYIDVNLEETLDW-APVRARVQKG 760
                            SKG   L    + ++ R     D+       W   +      G
Sbjct: 607 EAMLRVIRNHRRAAFGESKGYEALSIAPVPLDIRNCPQADLVAVAQRAWDKALEIGTAHG 666

Query: 761 IRNSNIMAIAPTATIANITGV-SQSIEPTYQNL-YVKSNLSGEFTVINPYLVRDLKARDL 818
            RN+ +  IAPT TI  +    +  IEP +  + + K    G F +IN  +   L+    
Sbjct: 667 FRNAQVSVIAPTGTIGLVMDCDTTGIEPDFALVKFKKLAGGGYFKIINRMVPSALRTLGY 726

Query: 819 WDSVMINDLKYYDG 832
            ++ +   + Y  G
Sbjct: 727 GEAAIAAIINYAVG 740



 Score = 58.9 bits (141), Expect = 2e-12
 Identities = 38/102 (37%), Positives = 55/102 (53%), Gaps = 5/102 (4%)

Query: 368 PQLSSCYLTTVPDDL---SGIYHAIHDNAMLSKFAGGLGNDWTPVRALGSYIKGTNGKSQ 424
           PQ  +C++ +V DDL    GI       A L K+  G G +++ +RA G  + G  GKS 
Sbjct: 194 PQPHACFIQSVNDDLVNDGGIMDLWVREARLFKYGSGTGTNFSSLRASGESLSG-GGKSS 252

Query: 425 GVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLETWHLDIEEFI 465
           G++ FLK+ +  A A+  GG  R+ A     +  H DIEEFI
Sbjct: 253 GLMSFLKIGDRAAGAIKSGGTTRRAAKMVICDIDHPDIEEFI 294