Pairwise Alignments

Query, 959 a.a., Ribonucleoside-diphosphate reductase subunit alpha from Pseudomonas putida KT2440

Subject, 629 a.a., Ribonucleoside-diphosphate reductase (NCBI) from Rhodospirillum rubrum S1H

 Score =  297 bits (760), Expect = 2e-84
 Identities = 211/636 (33%), Positives = 312/636 (49%), Gaps = 97/636 (15%)

Query: 287 INHERDQQFTYLGLQTLYDRYFIHKDGVRFELPQVFFMRVAMGLALEEKDKEARAIEFYN 346
           +   RD +    G   L DRY +  +G+     Q  F RV+   A    D  A A   Y+
Sbjct: 44  LERSRDDKLNAFGKAMLGDRYLLPGEGI-----QDMFARVSCAFA----DNAAHAQRLYD 94

Query: 347 LLSSFDYMASTPTLFNAGTLRPQLSSCYLTTVPDDLSGIYHAIHDNAMLSKFAGGLGNDW 406
            +S   +M +TP L N GT R    SC+L TVPD L GI    ++N  L+   GG+G  W
Sbjct: 95  AMSKLWFMPATPILSNGGTQRGLPISCFLNTVPDSLEGIVAIWNENVDLASNGGGIGTYW 154

Query: 407 TPVRALGSYIKGTNGKSQGVVPFLKVVNDTAVAVNQGGKRKGAVCAYLETWHLDIEEFIE 466
             VR++G  +KG NG + G++PF++V++   +A++QG  R+G+   YL+  H +IEEF+E
Sbjct: 155 GGVRSIGEAVKG-NGATSGIIPFIRVMDSLTLAISQGSLRRGSAAVYLDIHHPEIEEFLE 213

Query: 467 LRKNTGDDRRRTHDMNTANWIPDLFMKRVFDDGKWTLFSPSEVPDLHDLTGKAFEERYEY 526
           +RK +GD  R++ +++ A  I D FM+ V DD ++ L SP                    
Sbjct: 214 IRKASGDFNRKSLNLHHAINITDDFMEAVRDDRQFALKSPKSG----------------- 256

Query: 527 YEALTEYNKIKVFKTVQAKDLWRKMLSMLFETGHPWLTFKDPCNLRSP--QQHVGV-VHS 583
                     +V ++V A+ LW+K+L    +TG P+L F D  N   P  Q+ +G+ V S
Sbjct: 257 ----------EVLRSVGARQLWQKILETRLQTGEPYLLFTDTVNRALPKHQRDLGLRVSS 306

Query: 584 SNLCTEITLNTNKDE-----IAVCNLGSINLPNHIVDGKLDTTKLQRTVNTAVRMLDNVI 638
           SNLC EITL T +D       AVC L S+N+         +       +   +R LDNV+
Sbjct: 307 SNLCAEITLPTGRDHRGQERTAVCCLSSLNIETWD-----EWENAPGFIEDVLRFLDNVL 361

Query: 639 DINYYSVP----QARNSNFKHRPVGLGIMGFQDALYLQHIPYGSDAAVEFADKSMEAVSY 694
                + P    +A  +  + R VGLG+MGF   L  + IP+ S  A  +  +    +  
Sbjct: 362 SHFIETAPDGMERAAYAAMRERSVGLGVMGFHSFLQARGIPFESALAKSWNLRLFRKIRR 421

Query: 695 YAIQASCDLADERGAYETFQGSLWSKGILPLDSQQILIEARGQKYIDVNLEETLDWAPVR 754
            A  AS DLADERGA                                          P  
Sbjct: 422 DADAASVDLADERGA-----------------------------------------CPDA 440

Query: 755 ARVQKGIRNSNIMAIAPTATIANIT-GVSQSIEPTYQNLYVKSNLSGEFTVINPYLVRDL 813
           A      R S  +AIAPTA+I+ I  G S  +EP   N+Y    LSG F+V NP+L R L
Sbjct: 441 AERGMKARFSAKLAIAPTASISIICGGTSACVEPIPANVYTHKTLSGSFSVRNPHLARRL 500

Query: 814 KARDLWDSVMINDLKYYDGSVQQIERIPQELKDLYATAFEVETKWIVDAASRRQKWIDQA 873
             + L  +     +  ++GSVQ +E +  + K ++ TAFE++ +WI+D A+ R  +I Q+
Sbjct: 501 ADKGLDTAETWQSIIEHEGSVQHLEGLSDDEKLVFRTAFEIDQRWIIDLAADRAPFICQS 560

Query: 874 QSLNLYI-AGASGKKLDVTYRMAWYRGLKTTYYLRA 908
           QS+NLY+ A A    L + +  AW RGLK+ YY R+
Sbjct: 561 QSINLYLPADADKWDLHMLHWTAWRRGLKSLYYCRS 596