Pairwise Alignments

Query, 412 a.a., porin-like protein from Pseudomonas putida KT2440

Subject, 439 a.a., outer membrane porin, OprD family. from Pseudomonas stutzeri RCH2

 Score =  229 bits (583), Expect = 2e-64
 Identities = 141/432 (32%), Positives = 214/432 (49%), Gaps = 30/432 (6%)

Query: 7   LPFALLGAGVIAGLPGTSLAAGFVEDGKATLGLRNFYINRNFTNPSNPQSK--AEEWTQS 64
           L  AL  A V A    +  A GF+E    +L  RNFY NR+F +  +      +EEW   
Sbjct: 12  LSLALGSAPVFAQ---SETAEGFIEGSTLSLINRNFYFNRDFRDGESAAGNGYSEEWAHG 68

Query: 65  FILDARSGFTEGPIGFGVDVLGLWSVKLDGGGGTYGTA----LLPRHDDGRPADDYGRLA 120
            +    SG+T+G +G G D   +  +KLD G G  G      LLP    G P DD+ R+ 
Sbjct: 69  LMAFFESGYTQGSVGIGFDAFAMLGLKLDSGSGRSGVGGSIDLLPHDSAGDPEDDFTRVG 128

Query: 121 VAGKARISKTELKIGEWMPVLPILRSDDGRSLPQTFRGGQVTSNEIAGLTLYGGQFRGNS 180
            A KAR+  TE+K G+  P  P++   D R LP++F+G  V +N +  LTL GG+    S
Sbjct: 129 GAVKARLLDTEIKAGDVFPTTPVVHFGDSRLLPESFKGVTVVNNSLDDLTLQGGRLHAMS 188

Query: 181 PRNDASMED---MSYGGGV-SDRFNFVGGEYKFNQDRTQVGLWNAVLKDVYQQQYLQLSH 236
             N ++M +     YGGGV +    + GG+Y  N++   + L+ + LKD + Q Y   S 
Sbjct: 189 QPNTSNMNEDFVTFYGGGVDAPWLGYAGGDYSVNEN-ISLSLYTSRLKDAWNQHYFGASA 247

Query: 237 SQPVGD-WTLGANLGYFHGDEDGSERAGQLDNKTYSGMFSAKYGGSTFWVGLQKVDGDTW 295
           + P+ D   L A+  Y+   ++G E  G+ +N  +S      +G  T     Q+ +G+  
Sbjct: 248 TYPLSDIVALLASFNYYKATDEGRELLGEFNNNIWSSSLGVAFGAHTVTASYQRNNGNND 307

Query: 296 MRVNGTSGGTLANDSYN-SSFDNANERSWQVRHDFNFVTVGVPGLTLMNRYISG------ 348
                 +     N+S   S F++  E+SW +R+D N    G+PGLT M RY  G      
Sbjct: 308 FDYLRQADSIYLNNSIQYSDFNSPKEQSWMLRYDLNMAEYGIPGLTFMTRYARGWGADYS 367

Query: 349 --------RDVHSGGVTDGKEWVRETELAYVIQSGAFKDLSVKWRNSSIRRDYSNNEFDE 400
                   +D +   +T    W R+ E  YV+Q+G+ KDLS++ R ++ R     ++ DE
Sbjct: 368 NANEVYMRQDDNGAPLTGQNRWERDVEARYVVQTGSLKDLSLRVRQATTRATAFESDLDE 427

Query: 401 NRLIFNYPLSLL 412
            R I  YPLS+L
Sbjct: 428 VRFIAEYPLSIL 439