Pairwise Alignments

Query, 412 a.a., porin-like protein from Pseudomonas putida KT2440

Subject, 448 a.a., outer membrane porin from Pseudomonas syringae pv. syringae B728a

 Score =  210 bits (535), Expect = 6e-59
 Identities = 141/430 (32%), Positives = 208/430 (48%), Gaps = 45/430 (10%)

Query: 26  AAGFVEDGKATLGLRNFYINRNFTNPSNPQSKAEEWTQSFILDARSGFTEGPIGFGVDVL 85
           AAGF+ED KA++  R  Y N +         + E  T     D  SGFT+G +GFG+D  
Sbjct: 21  AAGFLEDSKASVSSRTLYFNNDLREGFRASDQRETST-GLKFDYLSGFTQGTVGFGLDAQ 79

Query: 86  GLWSVKLDGG----GGTYGTALLPRHDDGRPADDYGRLAVAGKARISKTELKIGEWM-PV 140
            +  + L GG           ++P   DG    D+ R+    K R SKTELK+G  + P 
Sbjct: 80  AVMGLHLGGGIEHHNANTANTVVPTDTDGSSVSDWSRVGANAKMRFSKTELKVGNALAPN 139

Query: 141 LPILRSDDGRSLPQTFRGGQVTSNEIAGLTLYGGQFRGNSPRNDASMEDMSYGGG--VSD 198
           LPIL S+DGR LPQ F GG +TS ++  +T   GQ   +  R  ++  D+S  G    +D
Sbjct: 140 LPILVSNDGRLLPQAFEGGILTSKDLDNVTFTAGQLNKSIGRASSNWTDLSVAGATQTAD 199

Query: 199 RFNFVGGEYKFNQDRTQVGLWNAVLKDVYQQQYLQLSHSQPV-GDWTLGANLGYFHGDED 257
           +F F G ++K  +D T +  + A L+D Y+Q +L L H   +  D +   +L YF+   D
Sbjct: 200 QFRFAGADWKVTKDLT-LQYYYANLEDFYKQHFLGLVHVYQIDNDQSFKTDLRYFNSSAD 258

Query: 258 G-----------------SERAGQLDNKTYSGMFSAKYGGSTFWVGLQK----------- 289
           G                 +   G++DN+T+S MF+   GG +F VG Q+           
Sbjct: 259 GKNSEAAAGYRFNNNGGYASHTGEVDNQTWSAMFTYALGGHSFMVGHQQVGDSGGMVYLG 318

Query: 290 ----VDGDTWMRVNGTSGGTLANDSYNSSFDNANERSWQVRHDFNFVTVGVPGLTLMNRY 345
               VDG      NG S   L  DS  + F+ A E +   ++ ++F  VGVPGL     Y
Sbjct: 319 QGNVVDGRGRPEGNGGSSFYLFTDSMINGFNRAGENTTFGQYSYDFAKVGVPGLKAAIAY 378

Query: 346 ISGRDVH--SGGVTDGKEWVRETELAYVIQSGAFKDLSVKWRNSSIRRDYSNN-EFDENR 402
           +SG D+   +  +    EW R+  + YVIQSG  K      R+ S R D +   + D+ R
Sbjct: 379 LSGDDIRDVNRNLGSHSEWERDMRVDYVIQSGPLKGFGTTVRHGSFRGDSATTADTDQTR 438

Query: 403 LIFNYPLSLL 412
           ++FNY  S +
Sbjct: 439 ILFNYTYSFM 448