Pairwise Alignments

Query, 298 a.a., putative inner membrane protein from Pseudomonas putida KT2440

Subject, 483 a.a., formate transporter FocA from Vibrio cholerae E7946 ATCC 55056

 Score = 64.3 bits (155), Expect = 5e-15
 Identities = 52/245 (21%), Positives = 107/245 (43%), Gaps = 39/245 (15%)

Query: 57  AGLSMGLSLMAMG------LFYARLPEGAGA------QVVASIGYSAGFLAVILARQQLF 104
           +G+ +GLS+MA        LFY  +  G+ +      ++   + +S G + +++   +LF
Sbjct: 33  SGMILGLSVMAGAFIGLAFLFYITVTTGSASAGWGLSRLAGGVAFSMGLILIVICGGELF 92

Query: 105 TENTLTAVLPVMTAPTLANFGRLLRLWGVVLLGNLAGTLLVAWVMLELPIF---DSKTDV 161
           T + L+++     A    +FG++L +WG V +GN  G + +  ++    ++   + +  +
Sbjct: 93  TSSVLSSI---SWANREISFGKMLSIWGKVYVGNFIGAIFLLLLVTAAGLYQLDEGQWGL 149

Query: 162 AFLEVGRKVMKNDISQMFAKGIVSGWMIATMVWMIPSMEHA--KIWIILMITYLMALGDF 219
             L + +  + +   Q FA GI+   ++   +W+  S  +A  K  + +M   +     F
Sbjct: 150 NALNIAQHKLHHTTVQAFALGILCNLLVCLAIWLTFSSANAMTKAAMTIMPVAMFVSSGF 209

Query: 220 THIVVGSVEVSYLV----WAGDETW---------------SRFWLEFALPTLAGNIIGGS 260
            H V     V   +    +A D  W               ++F     +P   GNI+GG+
Sbjct: 210 EHCVANMFMVPLGIVIQNFAPDSFWQQVGVTASQYSDLNVTQFITANLIPVTLGNIVGGA 269

Query: 261 FIFAL 265
            +  L
Sbjct: 270 VLVGL 274