Pairwise Alignments

Query, 861 a.a., Sensory box protein from Pseudomonas putida KT2440

Subject, 1071 a.a., Diguanylate cyclase/phosphodiesterase from Sinorhizobium meliloti 1021

 Score =  377 bits (968), Expect = e-108
 Identities = 202/450 (44%), Positives = 285/450 (63%), Gaps = 5/450 (1%)

Query: 404  RDGKAIGFRGTASDITDEVD---AHARIQHLSLHDPLTGLANRNKLARHLEQALLRGSDS 460
            RDG +I  R        E D   A  ++ H++ HD LTGLANR       E+AL   S+ 
Sbjct: 619  RDGISIFCRDITERRRAEEDTLLAQKQMAHMARHDMLTGLANRMFFRECFEEAL-NESNH 677

Query: 461  PPLTLLLLDLDNFKPINDSLGHAAGDAVLQEVATRLRDTTRDGDLVARLGGDEFILVLSG 520
              + +L LDLD FK +ND+LGH AGDA+L++V+TRL    R  + VARLGGDEF ++   
Sbjct: 678  ARMAVLCLDLDGFKAVNDTLGHPAGDALLRQVSTRLIQAVRTTETVARLGGDEFAIIQPL 737

Query: 521  MDNSSEIDRFCARLIGLLQQPIVFENQPLHIGASIGVAQTRNQGFDAGELIRCADIALYQ 580
             ++  E  R   RLI  L +P   E    ++G SIG+A     G  A ELI+ ADIALY 
Sbjct: 738  TESRDEAFRLAQRLIDTLSEPFSIEGAAANVGTSIGIAFAPEDGTSADELIKAADIALYS 797

Query: 581  AKADGKNTWRYFVAEMNQQIQYRRQLENDLRRALRNEEFELHYQPRYRLDDLRIVAVEAL 640
            AK+ G+ T++ F   M+ Q+Q  +Q++  +R AL   EFELHYQP   L+   +   EAL
Sbjct: 798  AKSSGRGTYKLFDVAMHAQLQAHQQMKITMRDALAKGEFELHYQPLVSLESRCVSCCEAL 857

Query: 641  VRWRHPQEGLLAPDTFIPLAEQSDIIVALGRWVLREACRTAHDWPADVLVSVNLSPAQFL 700
            +RWRHP+ G++AP  FIP+AE++ +IV +G W+L EACR A  WP  V V+VNLSP QF 
Sbjct: 858  LRWRHPERGMIAPSEFIPIAEETGLIVPIGEWILGEACRQAARWPERVSVAVNLSPVQFK 917

Query: 701  RSDVVADVRETLLDTAFPAQRLELEITENVMLNDIEGALGTMLSLKELGVRLNMDDFGTG 760
              ++V  V + L  T     RL+LEITE V+L++ E  L  +  L+ LGV++ MDDFGTG
Sbjct: 918  HRNLVRAVAKALSATRLDPARLQLEITETVLLDESEHNLELLQDLRRLGVKIAMDDFGTG 977

Query: 761  YSSLGYLRTYPFDSIKIDKRFISGLNNNGGSDRAVVQAIINLGEAMGLTVTAEGVESEHQ 820
            YSSLGYLR++PFD IK+D+ F+  L  +G    A+V+A+  LG+++G+T + EGVE+E Q
Sbjct: 978  YSSLGYLRSFPFDKIKVDQAFVRDL-PHGKESLAIVKAVAGLGQSLGMTTSVEGVETEDQ 1036

Query: 821  LKSLEKDRCHEVQGYYLSKPLDSAGLTALL 850
            L  ++ +  +EVQGY  S+PL +A ++ L+
Sbjct: 1037 LAVVDSEGFNEVQGYLFSRPLPAAEISKLI 1066



 Score = 33.1 bits (74), Expect = 9e-05
 Identities = 32/129 (24%), Positives = 52/129 (40%), Gaps = 20/129 (15%)

Query: 302 LEASEQRFRAVAESASDWIWETDRQQRLTYLSQRFANVTGYPVD-----GWLG--HPLNQ 354
           L  SE RFRA+A+ A   IW  D     ++ ++ +   TG         GW+   HP ++
Sbjct: 264 LRESEARFRAIADDAPVMIWVADPTGDTSFFNRLWLETTGQTEAEALGFGWVDVIHPDDR 323

Query: 355 LLACDTTPLSPWLDALTAAEPQQLANLRCTYRDQNGQNRYC---RISARAIWRDGKAIGF 411
               +T     +  A    EP     +R  YR +     +     +       DG  +G+
Sbjct: 324 QAVQET-----FFRATAGKEP-----VRSEYRLRRADGSWAWVIDVGQPRFSADGTFLGY 373

Query: 412 RGTASDITD 420
            G+  DIT+
Sbjct: 374 VGSVLDITE 382



 Score = 32.7 bits (73), Expect = 1e-04
 Identities = 32/134 (23%), Positives = 57/134 (42%), Gaps = 10/134 (7%)

Query: 292 LVHLQQSNQALEASEQRFRAVAESASDWIWETDRQQRLTYLSQRFANVTGYPVDGWLGHP 351
           + +L+++ + L ASE+ +R++ +      W  D    +  +  R++ +TG      LG  
Sbjct: 128 ITNLRRTEETLRASEEHYRSLVDLHPQVPWTADTAGEVLEVGPRWSELTGLGEKETLGSG 187

Query: 352 LNQLL-ACDTTPL-SPWLDALTAAEPQQLANLRCTYR--DQNGQNRYCRISARAIW-RDG 406
             + +   D   L   W  +L +  P       C YR   + G  R+ R  A A    DG
Sbjct: 188 WAKAVHPQDAGALQEEWRRSLASGAP-----FDCEYRLLTKTGDYRWFRARAAAKRDADG 242

Query: 407 KAIGFRGTASDITD 420
           K + + G   DI +
Sbjct: 243 KIVRWYGVLEDIDE 256