Pairwise Alignments

Query, 948 a.a., RNA polymerase-associated protein RapA from Pseudomonas putida KT2440

Subject, 428 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

 Score = 51.2 bits (121), Expect = 1e-10
 Identities = 39/117 (33%), Positives = 59/117 (50%), Gaps = 4/117 (3%)

Query: 477 LIDTLKMLKRTKVLVICAHAETAMDLEDALRVRSGIPASVFHEGMSILERDRAAAYFADE 536
           L+  LK  +  +VLV     E A  L   L  ++GI A+V H   S  ER+ A A F + 
Sbjct: 249 LVALLKQHQWPQVLVFIGAKENADSLTKKLN-KAGIVATVLHGDKSQSEREAALAEFKNG 307

Query: 537 EFGAQVLICSEIGSEGRNFQFAHHLVMFDLPAHPDLLEQRIGRLDRIGQKHTIQLHI 593
               QVLI +++ + G + +    ++ F+LP H +    R+GR  R GQ H I L +
Sbjct: 308 T--TQVLIATDLLARGIHIELLPVVINFELPMHAETYVHRVGRTARAGQ-HGIALSL 361