Pairwise Alignments

Query, 948 a.a., RNA polymerase-associated protein RapA from Pseudomonas putida KT2440

Subject, 460 a.a., ATP-dependent RNA helicase DbpA from Vibrio cholerae E7946 ATCC 55056

 Score = 44.7 bits (104), Expect = 1e-08
 Identities = 32/120 (26%), Positives = 53/120 (44%), Gaps = 6/120 (5%)

Query: 487 TKVLVICAHAETAMDLEDALRVRSGIPASVFHEGMSILERDRAAAYFADEEFGAQVLICS 546
           T  +V C       ++ DAL  +SG      H  M   ERD+A   FA++     +L+ +
Sbjct: 244 TSSVVFCNTKREVQNVADALH-QSGFSVIELHGDMEQRERDQALVQFANKSIS--ILVAT 300

Query: 547 EIGSEGRNFQFAHHLVMFDLPAHPDLLEQRIGRLDRIGQKHTIQLHIPYLQDSPQERLFQ 606
           ++ + G +      +  +DL   P++   RIGR  R G K    L   +  D+   R+ Q
Sbjct: 301 DVAARGLDVDNLDAVFNYDLSRDPEVHVHRIGRTGRAGSK---GLAFSFFSDNESYRVAQ 357