Pairwise Alignments

Query, 754 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

Subject, 886 a.a., Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) (NCBI) from Rhodospirillum rubrum S1H

 Score =  349 bits (895), Expect = e-100
 Identities = 186/425 (43%), Positives = 265/425 (62%), Gaps = 1/425 (0%)

Query: 281 QARASLQQAAHYDALTNLLNRRGFNQVFAERLVEHQASENRLAVMFLDIDHFKRINDSLG 340
           +A   ++  ++YD LT L NR  F     + +V+ +     LAVMF+D+D F  +ND+LG
Sbjct: 435 KAEERIRYLSNYDTLTRLPNRVLFRDRLYQAVVQARRGHGGLAVMFIDLDQFSLVNDTLG 494

Query: 341 HDAGDELLKVIANHIKAATRNHDLVARFGGDEFCVV-TSLNSRDEARHLAQRIMQRMKDP 399
           H AGD LL  IA+ I AA    D VAR GGDEF ++ T+L S D A  LA+R++  ++ P
Sbjct: 495 HAAGDHLLMTIASRINAAAEEADTVARVGGDEFALIQTALTSADSAASLARRLIDVIRTP 554

Query: 400 IDLGGRRMVMTTSIGISIFPDDGSTAEELLKHADLALYQSKDNGRNSLNFFNDSLKARAS 459
           +DLGGR +V+  ++GI+I+P DG+  + L+K+AD+A+Y++  +G +S  FF++ + A A+
Sbjct: 555 VDLGGREVVIGANVGIAIYPQDGTDPDNLMKNADMAMYRAVKSGDDSCCFFSNEMNAEAA 614

Query: 460 IALQLEEELRLALLEERGLCVHYQPIFDLRSGQVAKLEALVRWQHPQHGLLGPDRFVGIA 519
           + L LEE+LR AL     L +HYQ  F + SG+    EAL RW HP  G + P RF+ +A
Sbjct: 615 VRLSLEEDLRRALDSGDQLFLHYQLQFCIESGRPVGAEALARWTHPTLGAIPPTRFIPVA 674

Query: 520 EANGLIIDLDLWVLRHACADLAHLQRHGYGEVQVTVNCSAVTLSHDELPNEVEKALFHAG 579
           E +GLI+ L  WVL  A A+ A  +  G G + + VN SAV      L   V   L   G
Sbjct: 675 EDSGLILALGDWVLGTALAEYARWRAAGCGRLTIAVNMSAVQFRQKGLVERVTDLLAQHG 734

Query: 580 LAPRHLELEVTENALVGDIQRTVSLLKRVRALGVALSIDDFGTGYSSLAYLKRLPLDVLK 639
           + P  LELE+TE+ L+ D  + V+ L  +   G+ LSIDDFGTGYSSL YLK   +D LK
Sbjct: 735 VPPEDLELELTESMLMQDADQAVAQLTALSQAGIRLSIDDFGTGYSSLGYLKLFRVDKLK 794

Query: 640 IDRTFLQDVPGSQKDREIVQAIIAMAHTLHLRVVSEGVETAEQQAFLESHGCDYLQGYLL 699
           +D++F++DV     D  I +AII + H+L L V++EGVET EQ A+L   GCD +QGYL+
Sbjct: 795 VDQSFVRDVTEDGNDAVIARAIINLGHSLGLEVIAEGVETPEQMAYLRREGCDVVQGYLM 854

Query: 700 GRPVP 704
             P P
Sbjct: 855 AYPEP 859