Pairwise Alignments

Query, 418 a.a., branched chain amino acid transporter - permease subunit from Pseudomonas putida KT2440

Subject, 358 a.a., high-affinity branched-chain amino acid transport permease protein from Phaeobacter inhibens DSM 17395

 Score =  135 bits (341), Expect = 2e-36
 Identities = 103/344 (29%), Positives = 167/344 (48%), Gaps = 36/344 (10%)

Query: 92  RYVIIGLIVVALVWPFF-GSRGAVDIATLILIYVLLGLGLNIVVGLAGLLDLGYVGFYAV 150
           RY ++ L +  LV PF      A  I    LIY +  +GLNI+VG  G + LG  GF AV
Sbjct: 28  RYYVV-LALAFLVVPFVVNDYWANAILLPFLIYSIAAIGLNILVGYCGQVSLGTGGFMAV 86

Query: 151 GAYS-YAMLSHYLGWSFWVCLPIAGLMAATFGFLLGFPVLRLRGDYLAIVTLGFGEIIRL 209
           GAY+ Y +++ +   S ++ + +AG + A      G P LR++G YLA+ TL   +   +
Sbjct: 87  GAYACYKLMTAFPEMSMFIHVLLAGGITALVCIGFGLPSLRIKGFYLAVATLA-AQFFLV 145

Query: 210 FLRNLTDWTGGPNGISNIPKPEFFGLTFERRAAEGMQTFHEFFGLQYNSINKVIFL-YLV 268
           +L N   W    +    I  PE                  + FG+     N   +  Y+ 
Sbjct: 146 WLFNRVPWFYNYSASGQISAPE-----------------RDVFGIIITGPNAPAWATYMF 188

Query: 269 ALLLALLALFVINRLLRMPIGRAWEALREDEIACRALGLNPTVIKLSAFTLGACFAGFAG 328
           +L+       V   L R  +GR+W A+R+ +IA   +G+NP   KLSAF +   F G +G
Sbjct: 189 SLIFLAFCALVARNLTRGTVGRSWMAIRDMDIAAEIIGVNPLKAKLSAFGVSGFFIGVSG 248

Query: 329 S-FFAARQGLV-TPESFTFIESAIILAIVVLGGMGSQLGVILAAIVMILLPELMRE---- 382
           + FF+   G V   E+F   +S ++L +V++GG+GS  G    A  ++LLP +++     
Sbjct: 249 ALFFSVYLGAVEVGEAFGINKSFLVLFMVIIGGLGSIFGSFAGAAFLVLLPVVLKVVGVD 308

Query: 383 --------FSEYRMLMFGALMVLMMIWRPQGLLPMQRPHMELRR 418
                    +  ++++ GAL+V+ +I  P G+  + R   E  R
Sbjct: 309 VLGWPTDIVAHIQLVIVGALIVIFLIAEPHGIAQLWRVAKEKLR 352