Pairwise Alignments

Query, 433 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

Subject, 645 a.a., Large exoproteins involved in heme utilization or adhesion from Pseudomonas fluorescens FW300-N2E2

 Score = 62.8 bits (151), Expect = 3e-14
 Identities = 81/308 (26%), Positives = 121/308 (39%), Gaps = 49/308 (15%)

Query: 49  VGRVKHDGTADLTFGLRGFSSHNISDFTDAFPRAAGLIPQPDGGVIAGL-YNASELGLVR 107
           V R   DG+ D +FG  G ++     + D+  + A    Q DG   A   Y + E+ + R
Sbjct: 102 VSRTLADGSLDTSFGNGGTATVPFY-WNDSLGQQASFSVQRDGSFFASAAYPSGEIYIAR 160

Query: 108 FKLNGEVDMSFGQAGTVFHKVEKMSASSAGRGRNNDGRQDSVFSSAVLGALTPAKDGNFY 167
           F   G +  SF +AG + H    +            G Q S      L       DG   
Sbjct: 161 FDATGALVSSFAEAG-ILHLPASV------------GIQPSRTIDVSLQG-----DGKVL 202

Query: 168 GVLGNRFAGDFSLLRCLANGALDAEFNGTGIVSVKHPTLDTDAPAVIASADGGAVVVGTL 227
                   G  +L R   +G LD+ F   G ++     LD  A A++   DG  ++ G  
Sbjct: 203 ------VTGQDTLTRLNQDGTLDSSFANGGSLA-----LDVHADALVLQDDGKILLAGAS 251

Query: 228 GDLSVGMRGFFCRYKADGSLDKTFGEEGYSIFDSVSAGIPHPELSQMELAHVAIMADGGY 287
           G ++  +R       ADGSLD  FG +G   + S SA     ++  +    + I    G 
Sbjct: 252 GGVATVIR-----LNADGSLDTGFGNQGRVSWGSQSAPFAVADMVVLADGKLLIGGSQGT 306

Query: 288 VACGYLTARDPWRFYGMVVRIDSTGRPEQSFNGGKPLLFELPDGVEVDFLWGGIAEMADG 347
            A GYL A         +V+++  G  + SF       + L  G + DFL G     A  
Sbjct: 307 SADGYLAA---------LVQLNPDGSLDHSFGNPDDGYYHLDGGRDDDFLLG----TASF 353

Query: 348 KVAVAGGA 355
             A+ GGA
Sbjct: 354 DDAIFGGA 361



 Score = 57.0 bits (136), Expect = 2e-12
 Identities = 80/282 (28%), Positives = 116/282 (41%), Gaps = 46/282 (16%)

Query: 148 SVFSSAVLGALTPAKDGNFY-------GVLGNRFAG-DFSLLRCLANGALDAEFNGTGIV 199
           S++ S  +G +T   DG  +       G+ G   +G   SL+R  ANG+LD  F+G G  
Sbjct: 5   SLWGSDKIGGITVDPDGAIWLGAYSRLGLGGEEDSGFTGSLVRFNANGSLDRHFSGDG-K 63

Query: 200 SVKHPTLDTDAPAVIASADGGAVVVGTLGDLSVGMRGFFCRYKADGSLDKTFGEEGYSIF 259
           S+    LD +     A   GG  +V     +         R  ADGSLD +FG  G    
Sbjct: 64  SLLPVALDIEDGGNAAVQPGGGYLVAQYVKVGDTWVSGVSRTLADGSLDTSFGNGG---- 119

Query: 260 DSVSAGIP---HPELSQMELAHVAIMADGGYVACGYLTARDPWRFYGMVVRIDSTGRPEQ 316
              +A +P   +  L Q   A  ++  DG + A     + + +     + R D+TG    
Sbjct: 120 ---TATVPFYWNDSLGQQ--ASFSVQRDGSFFASAAYPSGEIY-----IARFDATGALVS 169

Query: 317 SFNGGKPLLFELPDGVEVD-FLWGGIAEMADGKVAVAGGAVTRNAGYQRQVLLVRYDSKG 375
           SF   +  +  LP  V +       ++   DGKV V G           Q  L R +  G
Sbjct: 170 SF--AEAGILHLPASVGIQPSRTIDVSLQGDGKVLVTG-----------QDTLTRLNQDG 216

Query: 376 VLDPTFGEQGWRILAPFGDAVTYLQGLQVDLEQKILVSGDSG 417
            LD +F   G   L    DA+     LQ D   KIL++G SG
Sbjct: 217 TLDSSFANGGSLALDVHADALV----LQDD--GKILLAGASG 252



 Score = 48.5 bits (114), Expect = 6e-10
 Identities = 86/366 (23%), Positives = 132/366 (36%), Gaps = 75/366 (20%)

Query: 81  RAAGLIPQPDGGVIAGLYNASELG----------LVRFKLNGEVDMSFGQAGTVFHKVEK 130
           +  G+   PDG +  G Y+   LG          LVRF  NG +D  F   G     V  
Sbjct: 11  KIGGITVDPDGAIWLGAYSRLGLGGEEDSGFTGSLVRFNANGSLDRHFSGDGKSLLPV-A 69

Query: 131 MSASSAGRGRNNDGRQDSVFSSAVLGALTPAKDGNFYGVLGNRFAGDFSLLRCLANGALD 190
           +     G      G           G    A+    Y  +G+ +    S  R LA+G+LD
Sbjct: 70  LDIEDGGNAAVQPG-----------GGYLVAQ----YVKVGDTWVSGVS--RTLADGSLD 112

Query: 191 AEFNGTGIVSVKHPTLDT--DAPAVIASADGG--AVVVGTLGDLSVGMRGFFCRYKADGS 246
             F   G  +V     D+     +     DG   A      G++      +  R+ A G+
Sbjct: 113 TSFGNGGTATVPFYWNDSLGQQASFSVQRDGSFFASAAYPSGEI------YIARFDATGA 166

Query: 247 LDKTFGEEGYSIFDSVSAGIPHPELSQMELAHVAIMADGGYVACGYLTARDPWRFYGMVV 306
           L  +F E G  +    S GI            V++  DG  +  G  T          + 
Sbjct: 167 LVSSFAEAGI-LHLPASVGI-----QPSRTIDVSLQGDGKVLVTGQDT----------LT 210

Query: 307 RIDSTGRPEQSFNGGKPLLFELPDGVEVDFLWGGIAEMADGKVAVAGGAVTRNAGYQRQV 366
           R++  G  + SF  G  L  +    V  D     +    DGK+ +AG +           
Sbjct: 211 RLNQDGTLDSSFANGGSLALD----VHAD----ALVLQDDGKILLAGAS-------GGVA 255

Query: 367 LLVRYDSKGVLDPTFGEQGWRILAPFGDAVTYLQGLQVDLEQKILVSGDSGPNNNLSSMK 426
            ++R ++ G LD  FG QG R+      A   +  + V  + K+L+ G  G     +S  
Sbjct: 256 TVIRLNADGSLDTGFGNQG-RVSWGSQSAPFAVADMVVLADGKLLIGGSQG-----TSAD 309

Query: 427 GFAAQL 432
           G+ A L
Sbjct: 310 GYLAAL 315



 Score = 30.0 bits (66), Expect = 2e-04
 Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 10/107 (9%)

Query: 29  LVLPVGGKRYLLDGLGKTIMVGRVKHDGTADLTFGLRGFSSHNISDFTDAFPRA-AGLIP 87
           LVL   GK  L    G    V R+  DG+ D  FG +G     +S  + + P A A ++ 
Sbjct: 237 LVLQDDGKILLAGASGGVATVIRLNADGSLDTGFGNQG----RVSWGSQSAPFAVADMVV 292

Query: 88  QPDGGVIAGLYNASE-----LGLVRFKLNGEVDMSFGQAGTVFHKVE 129
             DG ++ G    +        LV+   +G +D SFG     ++ ++
Sbjct: 293 LADGKLLIGGSQGTSADGYLAALVQLNPDGSLDHSFGNPDDGYYHLD 339