Pairwise Alignments

Query, 397 a.a., Na(+)/H(+) antiporter NhaA 1 from Pseudomonas putida KT2440

Subject, 382 a.a., Na+/H+ antiporter NhaA from Vibrio cholerae E7946 ATCC 55056

 Score =  400 bits (1028), Expect = e-116
 Identities = 203/377 (53%), Positives = 266/377 (70%), Gaps = 8/377 (2%)

Query: 14  FFQLEAASGLLLIAAAVLALIINNSPLSYLYGGLLEVPVAVQVGALNIAKPLLLWINDGL 73
           FF++E+A G+LL+ AA +A++I NS +   Y   L   V            +  WINDGL
Sbjct: 8   FFKMESAGGILLVIAAAIAMVIANSAMGEGYQAFLHTYV--------FGMSVSHWINDGL 59

Query: 74  MALFFLLIGLEVKREVVDGHLSKPSQVILPATAAVGGMVVPALIYWFINRDNPAAVAGWA 133
           MA+FFLLIGLEVKRE+++G L      I PA AAVGGM+ PALIY   N ++PAA+ GWA
Sbjct: 60  MAVFFLLIGLEVKRELLEGALKSRETAIFPAIAAVGGMLAPALIYVAFNFNDPAAIQGWA 119

Query: 134 IPTATDIAFALGVLALLGKRVPVSLKLFLMTLAIIDDLGAIIVIALFYSGTLSSVSLLLA 193
           IP ATDIAFALG++ALLGKRVPVSLK+FL+ LAIIDDLG +++IALFYS  LS+++L + 
Sbjct: 120 IPAATDIAFALGIMALLGKRVPVSLKVFLLALAIIDDLGVVVIIALFYSSDLSTIALTIG 179

Query: 194 AACLLVLVAMNRLGVIKLGPYMIVGLILWVCVLKSGVHATLAGVALAFCIPLRTRNAESS 253
                VL  +N   V KL  Y++ GLILW+ VLKSGVHATLAGV + F IPL+    E S
Sbjct: 180 FIMTGVLFMLNAKHVTKLSIYLVAGLILWIAVLKSGVHATLAGVVIGFAIPLKGNKGEHS 239

Query: 254 PLLALEHALHPWVAYAILPIFAFANAGVSLAGMTVDSFTHPVPMGITIGLLLGKTVGVFG 313
           PL  LEHALHP+VA+AILP+FAFANAG+SL G+++   T  +P+G+ +GL LGK +G+F 
Sbjct: 240 PLKHLEHALHPYVAFAILPVFAFANAGISLQGVSLAGLTSMLPLGVALGLFLGKPLGIFS 299

Query: 314 LTWVAVKLRLAALPAGAGWGQILGVAILCGIGFTMSLFVGSLAFAPGSSEYAGMDRMGIL 373
            +W AVKL +A LP G  +  I  V++LCGIGFTMS+F+ SLAF   +  Y    R+GIL
Sbjct: 300 FSWAAVKLGVAKLPEGINFKHIFAVSVLCGIGFTMSIFISSLAFGQANEAYDTYARLGIL 359

Query: 374 TGSFFAAVIGYAVTAMA 390
            GS  AA++GY++  ++
Sbjct: 360 MGSTTAALLGYSLLRLS 376