Pairwise Alignments

Query, 397 a.a., Na(+)/H(+) antiporter NhaA 1 from Pseudomonas putida KT2440

Subject, 391 a.a., Na+/H+ antiporter NhaA (RefSeq) from Shewanella loihica PV-4

 Score =  447 bits (1149), Expect = e-130
 Identities = 224/371 (60%), Positives = 282/371 (76%), Gaps = 1/371 (0%)

Query: 14  FFQLEAASGLLLIAAAVLALIINNSPLSYLYGGLLEVPVAVQVGALNIAKPLLLWINDGL 73
           F   E+A G+LL+AA +LA+I+ NSPLS LY G L   + V+VG+L+I K L+ WINDGL
Sbjct: 8   FLSQESAGGILLMAAVILAMIMANSPLSGLYQGFLHTEMQVRVGSLDIDKTLIHWINDGL 67

Query: 74  MALFFLLIGLEVKREVVDGHLSKPSQVILPATAAVGGMVVPALIYWFINRDNPAAVAGWA 133
           MALFF+LIGLEVKRE+++G LS   Q  LP  AA+GGM+ PA IY   N  +P    GWA
Sbjct: 68  MALFFMLIGLEVKRELLEGALSSREQASLPTFAAIGGMIFPAAIYLIFNYADPITQVGWA 127

Query: 134 IPTATDIAFALGVLALLGKRVPVSLKLFLMTLAIIDDLGAIIVIALFYSGTLSSVSLLLA 193
           IP ATDIAFALG++ALLG RVPV+LK+FL+ LAIIDDLG +++IA+FYS  LS++SL++A
Sbjct: 128 IPAATDIAFALGIMALLGSRVPVALKVFLLALAIIDDLGVVVIIAMFYSTDLSAISLVVA 187

Query: 194 AACLLVLVAMNRLGVIKLGPYMIVGLILWVCVLKSGVHATLAGVALAFCIPLRTRNAESS 253
           A  +++LV +NR GV  L PY +VGLILW+ VLKSGVHATLAGV +AFCIPLR ++  SS
Sbjct: 188 ALAIVILVGLNRKGVTALAPYGVVGLILWIAVLKSGVHATLAGVIIAFCIPLRAKDG-SS 246

Query: 254 PLLALEHALHPWVAYAILPIFAFANAGVSLAGMTVDSFTHPVPMGITIGLLLGKTVGVFG 313
           P   LEH+LHPW  + ILPIFAFANAGV L+GM++     PVP+GI +GLLLGK +GV  
Sbjct: 247 PSEHLEHSLHPWSTFVILPIFAFANAGVDLSGMSLGDLLSPVPVGIALGLLLGKPLGVLL 306

Query: 314 LTWVAVKLRLAALPAGAGWGQILGVAILCGIGFTMSLFVGSLAFAPGSSEYAGMDRMGIL 373
            ++VAVKL+LAALP G GW  I  VA++CGIGFTMS+F+ SLAF      Y  + R+GIL
Sbjct: 307 FSFVAVKLKLAALPEGMGWRHIAPVAVMCGIGFTMSMFISSLAFIGDGEAYGDLARLGIL 366

Query: 374 TGSFFAAVIGY 384
           TGS  +AVIGY
Sbjct: 367 TGSIMSAVIGY 377