Pairwise Alignments

Query, 397 a.a., Na(+)/H(+) antiporter NhaA 1 from Pseudomonas putida KT2440

Subject, 389 a.a., Na+/H+ antiporter (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  445 bits (1144), Expect = e-129
 Identities = 225/371 (60%), Positives = 282/371 (76%), Gaps = 1/371 (0%)

Query: 14  FFQLEAASGLLLIAAAVLALIINNSPLSYLYGGLLEVPVAVQVGALNIAKPLLLWINDGL 73
           F   E+A G+LL+ A   A+++ NSPL+  Y G L   V V+VGAL++ KPLLLWINDGL
Sbjct: 8   FLSQESAGGILLLIAVAFAMLMANSPLAGFYQGFLGTEVQVRVGALDLHKPLLLWINDGL 67

Query: 74  MALFFLLIGLEVKREVVDGHLSKPSQVILPATAAVGGMVVPALIYWFINRDNPAAVAGWA 133
           MALFFLLIGLEVKRE+++G LS  +Q  LP  AA+GGM+VPA IY   N  +P   AGWA
Sbjct: 68  MALFFLLIGLEVKRELLEGALSSVAQASLPTFAAIGGMLVPAGIYLLFNYGDPITQAGWA 127

Query: 134 IPTATDIAFALGVLALLGKRVPVSLKLFLMTLAIIDDLGAIIVIALFYSGTLSSVSLLLA 193
           IP ATDIAFALG++ALLG RVPV+LK+FL+ LAIIDDLG I++IALFYS  LS+VSL++A
Sbjct: 128 IPAATDIAFALGIMALLGSRVPVALKVFLLALAIIDDLGVIVIIALFYSSDLSTVSLIIA 187

Query: 194 AACLLVLVAMNRLGVIKLGPYMIVGLILWVCVLKSGVHATLAGVALAFCIPLRTRNAESS 253
           +  ++ LVA+NR GV  L PY ++GLILWV VLKSGVHATLAGV +AFCIPLR ++  SS
Sbjct: 188 SIAIVGLVALNRKGVTSLAPYGVLGLILWVAVLKSGVHATLAGVIIAFCIPLRAKDG-SS 246

Query: 254 PLLALEHALHPWVAYAILPIFAFANAGVSLAGMTVDSFTHPVPMGITIGLLLGKTVGVFG 313
           P   LEH+LHPW  + ILP+FAFANAGV+L  M++D+   PVP+GI +GL+LGK +GV  
Sbjct: 247 PSEHLEHSLHPWSTFLILPVFAFANAGVALGNMSLDTLMSPVPVGIALGLMLGKPIGVML 306

Query: 314 LTWVAVKLRLAALPAGAGWGQILGVAILCGIGFTMSLFVGSLAFAPGSSEYAGMDRMGIL 373
            ++VAVKL+LA LP G GW QI  VA +CGIGFTMS+F+ SLAF      +  + R+G L
Sbjct: 307 FSFVAVKLKLAQLPDGIGWKQIAPVAAMCGIGFTMSMFIASLAFEQADPMFGDLARLGTL 366

Query: 374 TGSFFAAVIGY 384
            GS FAA+IGY
Sbjct: 367 MGSIFAALIGY 377