Pairwise Alignments

Query, 563 a.a., Recombinase-related protein from Pseudomonas putida KT2440

Subject, 573 a.a., site-specific recombinase, DNA invertase Pin from Dechlorosoma suillum PS

 Score =  112 bits (281), Expect = 3e-29
 Identities = 97/328 (29%), Positives = 151/328 (46%), Gaps = 39/328 (11%)

Query: 3   KVFSYIRFSSAKQSAGDSYARQVKAAKAFCDENGLEMADPREYLFFDKGRSAFKGKHLDD 62
           +  SY RFSS KQ  G S  RQ +    +   N     +       D+G SA+KGK+ + 
Sbjct: 12  QAISYSRFSSLKQGKGSSIERQREMFNEWLARNQGSYYESN-LSAKDEGLSAYKGKNKE- 69

Query: 63  TGELARFLSYVEDSTIPPGSYLVVESLDRLSREKVRDALPRFLDLLAKGINVYTSVDKRL 122
            G L   L  ++   +  G  LVVE++DRLSR +  DAL    D++  GI + T  D + 
Sbjct: 70  -GGLGAILEAIQQGLVRSGDVLVVEAIDRLSRAQAMDALRLLGDIVRAGIPILTLEDNQT 128

Query: 123 YTKD-YNELDLIISIISMSRAHEESAVKGGRVSSAWREKQKAARTTGKPLGKLR--PLWL 179
           YT++  N   L +    +  AHE S   G RV +AW+ K++ A+   KP  KL+  P W+
Sbjct: 129 YTEESLNGPQLFLLAAKVQGAHEYSKRLGSRVKAAWKVKEEKAKAGDKP-KKLQNIPCWV 187

Query: 180 DVTPDGYVLNPDKAAVVRRIFDLSTKGHGSRIIAATLNQEGIPAFSAGRKNFSGLWGFST 239
           D   +   LN D A  ++++ DL  +G G R +               R++ S      T
Sbjct: 188 D--RETLKLN-DLAPAIKQLIDLYLEGEGIREVC-----------YFARESLSFKVAART 233

Query: 240 VRHILDSRTTLGEYQPHIFTDGKRTPDGDPIKDYFPSVVTEDEFYLAQAARTSRKTHSVT 299
               LDS   LG ++                 + F ++++E EF+  Q     RK  + T
Sbjct: 234 FTRWLDSEVLLGHWRG---------------IECFEALLSEKEFFELQ---RQRKARTRT 275

Query: 300 KATTNFNVLAGILNCYKCGSAMHLQGQR 327
               NF  L+G++ C KCG + + + Q+
Sbjct: 276 PKQPNFRPLSGLVVCGKCGGSFNFRIQK 303