Pairwise Alignments

Query, 552 a.a., putative DNA ligase, ATP-dependent from Pseudomonas putida KT2440

Subject, 537 a.a., ATP-dependent DNA ligase from Sinorhizobium meliloti 1021

 Score =  307 bits (786), Expect = 8e-88
 Identities = 211/562 (37%), Positives = 285/562 (50%), Gaps = 40/562 (7%)

Query: 1   MKAFATLFLRLDATTSSNAKLEALRDYFDMAPAEDAAWAVYFLAGGRPRQLVPTRLLREL 60
           MKAFA L  RL  T   NAK+  L DYF  AP     +A+  +AG      V   L+R+L
Sbjct: 1   MKAFAELLDRLVLTPQRNAKIRLLVDYFRGAPDPSRGYALAAIAGTLSLNTVKPALIRDL 60

Query: 61  ATTLAGLPDWLFEESYQAVGDLAETISLLLPLHADGNEEGLATWVEQHLLPLRGLTPEQV 120
              L  + D LF  SY  VGDLAET+SL      D   + +        L   G +  +V
Sbjct: 61  L--LERMDDVLFHYSYDYVGDLAETVSLAWEPPPDVALQDIPLGEVVERLQRAGRS--EV 116

Query: 121 RQRLPPLWARLDRASLMLCLKLITGSFRVGVSKLLVTRALAQLAGLDAKRVAQRLVGYTD 180
           R  +     RLD +     LKL TG  R+GVS  L  +ALA++ G +   +     G   
Sbjct: 117 RSLVRDFLDRLDTSGRFALLKLATGGLRIGVSARLAKQALAEMGGKEVSEIETLWHG--- 173

Query: 181 IGHRPTAASYQRLIAPESADEHNQRGGQPYPFFLAHPLQVSSDQFDTLLGP-------PS 233
                        + P          G+     L  P    S    T +G        P+
Sbjct: 174 -------------LEPPYLPLFLWLTGEAEMPVLKTPAVFHSVMLATAVGDGDLDGLDPA 220

Query: 234 DWQIEWKWDGIRAQVVKRDGQLWVWSRGEELVTERFPELHGLAQTLPDGVVLDGEILVWK 293
           D+  EWKWDGIR Q+    G   ++SR  + ++  FPE+   A       V+DGE+LV  
Sbjct: 221 DFAAEWKWDGIRVQLANVGGARRLYSRSGDEISSAFPEIIEAADITG---VIDGELLVG- 276

Query: 294 PGETETELAVQPFALLQQRIGRKTLGKKLLNDAPVVLQAYDLLEWQGEDWRSRPQHERRS 353
            G   +  A   FA LQQR+ RKT+ +KL+++ P  ++AYD+L     D R  P   RR 
Sbjct: 277 -GTMRSNRATGTFADLQQRLNRKTVSRKLMDEYPAFIRAYDILFSGERDIRPEPFRVRRE 335

Query: 354 QLEHLVDEHPLAPVLLSPLLQGPDWADLARQREQSRSLGVEGLMLKQREALYGVGRTKDM 413
            L  L++        LSPL+    W +L   R       +EG+MLK+ ++ Y  GR K  
Sbjct: 336 ALSSLIEAASPQHFDLSPLVGFSSWKELDELRSSPPDPVIEGVMLKRLDSPYMAGRAK-- 393

Query: 414 GIWWKWKIDPFSVDAVLIYAQRGHGRRASLYSDYTFAVWDAPAGTPGRALVPFAKAYSGL 473
           G W+KWK  PF++DAVL+YAQRGHG+R+S YSD+TF VW    G  G +LVP  KAY G 
Sbjct: 394 GPWFKWKRAPFNIDAVLMYAQRGHGKRSSYYSDFTFGVW--AEGEDGASLVPVGKAYFGF 451

Query: 474 SDEEMRKVDAIIRKTTVETFGPVRSVTPT----LVFELGFEGIALSRRHKSGIAVRFPRM 529
           +D E+  +D  +R  TVE FGPVR+V        V E+ FEG+  S RHKSG+A+RFPR+
Sbjct: 452 TDAELEVLDRFVRDNTVERFGPVRAVRAEPDSGFVVEVAFEGLNRSTRHKSGVAMRFPRI 511

Query: 530 LRWRLDKPVEEADDLATLQALL 551
            R R DK   +AD L TLQA++
Sbjct: 512 ARLRPDKLPRDADRLETLQAMM 533