Pairwise Alignments

Query, 552 a.a., putative DNA ligase, ATP-dependent from Pseudomonas putida KT2440

Subject, 355 a.a., ATP-dependent DNA ligase from Sinorhizobium meliloti 1021

 Score = 63.9 bits (154), Expect = 1e-14
 Identities = 87/357 (24%), Positives = 150/357 (42%), Gaps = 43/357 (12%)

Query: 195 APESADEHNQRGGQPYPFFLAHPLQVSSDQFDTLLGPPSDWQIEWKWDGIRAQVVKRDGQ 254
           AP SA +  + GG P P   A P++  S    T L     WQ E KWDG R    K   +
Sbjct: 14  APSSAAK--KAGGFPLPVSTA-PMEARSA---TELPGGDAWQYEPKWDGFRCLAFKSGDE 67

Query: 255 LWVWSRGEELVTERFPELHGLAQTL-PDGVVLDGEILVWKPGETE---TELAVQPFALLQ 310
           + + ++  + +   FPE+  L + L PD  VLDGE+++   G       ++ + P A   
Sbjct: 68  VDIRAKSGKPLGRFFPEIVALLRRLEPDMFVLDGELVIEVDGRLSFDALQMRLHPAASRV 127

Query: 311 QRIGRKTLGKKLLNDAPVVLQAYDLLEWQGEDWRSRPQHERRSQLEHLVDEHPLAPVLLS 370
           Q++ ++T  K +L D         L    G      P   RR+ LE    ++ +A +L S
Sbjct: 128 QKLSQETPAKLILFDM--------LAGTDGTILTGEPLQTRRACLEAFAKKNAVAEMLES 179

Query: 371 PLLQGPDWADLARQREQSRSLGVEGLMLKQREALYGVG----------RTKDMGI-WWKW 419
                 D  +  R      +   +G++ K+R+ +Y  G          +T D  +  +++
Sbjct: 180 SPFT-LDIKEAERWLTSWEAGATDGVVAKRRDGVYECGERAMVKVKRLKTADCVVGGFRY 238

Query: 420 KIDPFSVDAVLIYAQRGHGRRASLYSDYTFAVWDAPAGTPGRALVPFAKAYSGLSDEEMR 479
           + D   V ++L+      G    +    T +  + PA T     +     ++G       
Sbjct: 239 ESDSSLVGSLLLGLYDTEGLLNHVGFTATISDKERPALTNQLEALREPPGFTG------- 291

Query: 480 KVDAIIRKTTVETFGPVRSVTPTLVFELGFEGIALSRRHKSGIAVRFPRMLRWRLDK 536
           K      + + E  G    V P LV E+ F+ ++ +RR + G      +++RWR DK
Sbjct: 292 KAPGGPSRWSSERSGEWEPVRPELVVEVRFDHVS-NRRFRHG-----TKLMRWRPDK 342