Pairwise Alignments

Query, 816 a.a., ATP-dependent helicase, DEAD box family from Pseudomonas putida KT2440

Subject, 863 a.a., Lhr-like helicases from Pseudomonas stutzeri RCH2

 Score = 1134 bits (2934), Expect = 0.0
 Identities = 573/820 (69%), Positives = 672/820 (81%), Gaps = 6/820 (0%)

Query: 3   AATDLANAWFAKRGWKPFAFQRRVWAAVERGESGLLHASTGAGKTYAVWLAALRAFK--- 59
           AA  L+  WFA R W+PF FQR VW A++RGESGLLHA+TG+GKTYAVWL AL  F    
Sbjct: 4   AAGLLSEQWFASREWQPFPFQREVWQAIDRGESGLLHATTGSGKTYAVWLGALNRFATKA 63

Query: 60  PRPQGRHL-APIQVLWVTPMRALAADTARALQAPLDELQLPWSVGVRSGDTNSAERARQA 118
           PRP      AP+ VLW+TPMRALAADTARALQAPL +L + WS+G+R+GDT+ AERARQ 
Sbjct: 64  PRPNTTDKPAPLTVLWITPMRALAADTARALQAPLYDLGINWSIGLRTGDTSGAERARQG 123

Query: 119 RRLPSVLITTPESLTLLLTRAKAREDFATLQLVVVDEWHELLGNKRGVQLQLALARLRHW 178
           RRLPS L+TTPESLTLLLTRA AR+ FA L+++VVDEWHELLGNKRGVQLQLALARLR W
Sbjct: 124 RRLPSALVTTPESLTLLLTRADARQAFAGLRMLVVDEWHELLGNKRGVQLQLALARLRQW 183

Query: 179 HPGLPTWGLSATLGNLQHARDVLL-PQGGLLVQGRQDKALQVDTLLPKAIERFPWAGHMG 237
            P L  WGLSATLGN  HA DVLL P  G LVQG+ DK L+VDTLLP  IERFPWAGH+G
Sbjct: 184 MPELIVWGLSATLGNQPHALDVLLYPGSGRLVQGKVDKDLRVDTLLPPCIERFPWAGHLG 243

Query: 238 LKMLDQVCHEIDASASSLVFTNTRAQAEIWYQALLEARPDWAGLIALHHASLARDTRDWV 297
           L+ML QV  EID++A++LVFTNTR+Q+EIWYQALL+ARPDWAGLIALHH SLAR+ RDWV
Sbjct: 244 LRMLPQVVEEIDSAATTLVFTNTRSQSEIWYQALLDARPDWAGLIALHHGSLAREVRDWV 303

Query: 298 ERSLKQGSLKAVICTSSLDLGVDFLPVERVLQIGSAKGIARLMQRAGRSGHAPGRRSRVT 357
           E+ LKQG+LKAV+CTSSLDLGVDFLPVERVLQIGS KG+ARLMQRAGRSGHAPGR SRVT
Sbjct: 304 EQGLKQGALKAVVCTSSLDLGVDFLPVERVLQIGSPKGVARLMQRAGRSGHAPGRTSRVT 363

Query: 358 LVPTHSLELVEAAAARQALLAGHIEARFSPRLCMDVLVQHLVSMALGSGFRPEQLLAEVR 417
           LVPTHS+E+VEAAAA+ A+    IEAR +P   +DVLVQHLVSMALG GFRP++L AEVR
Sbjct: 364 LVPTHSVEVVEAAAAQVAIGERRIEARSAPHRPLDVLVQHLVSMALGGGFRPDELFAEVR 423

Query: 418 STWAFRQLRDSQWQWALDFVCHGGSSLTAYPDYQRVERQADGVYRVTSERLARRHRMGIG 477
             W++R L +  WQWAL FV HGG SLTAYPDYQRVE    G+++V S R+A RHRM IG
Sbjct: 424 QAWSYRDLNEDHWQWALAFVRHGGHSLTAYPDYQRVEPDEAGLWKVPSRRVALRHRMSIG 483

Query: 478 TIVSDANLQLKYWSKGGGGKTLGSVEEAFIARLRPGDTLVFAGRVLELVRVENMTAYVRR 537
           TIVSDA+L +K+W+KGG G++LG++EE FIARLRPGD  +F GR+LELVRVENMTAYV R
Sbjct: 484 TIVSDASLSVKFWAKGGSGRSLGTIEEGFIARLRPGDNFLFGGRLLELVRVENMTAYVSR 543

Query: 538 STARKAAVARWNGGRMPLSSELADALVEQLDAAAHERFEGPEMRAVRPLLALQAQWSALP 597
           +T RKAAV RWNGGRMPLSSELADA+VEQL AA+   FE PEM  V PLL +Q  WSALP
Sbjct: 544 ATGRKAAVPRWNGGRMPLSSELADAVVEQLGAASRGHFESPEMGLVEPLLRVQMDWSALP 603

Query: 598 TTSTLLAETFKSRQGWHLFLYPFAGRMANLGLANLIAWRVSRAQPLSVSIAVNDYGFELL 657
           T +TLLAE  KSR+GWHLFLYPFAGR  +LGLA+L+AWR+ + +PL+ SIAVNDYGFELL
Sbjct: 604 TETTLLAEVMKSREGWHLFLYPFAGRHVHLGLASLLAWRLGQHRPLTFSIAVNDYGFELL 663

Query: 658 SPAQVDWASHL-PQALGTADLLEDVLASLNAGEMALRRFREIAQIAGLVFGGYPAAQKST 716
           S  +VDW   L P+     +LL DVLASLNAGE+A RRFREIA+IAGLVF GYP AQKS 
Sbjct: 664 SATEVDWMHWLTPELFSEDNLLHDVLASLNAGELARRRFREIARIAGLVFSGYPGAQKSA 723

Query: 717 RQIQASSGLFYEVFRKHDAGNLLLGQARDEVLSEELEIERLHRQLLKMSELQLDLQALRR 776
           RQ+QASSGLF++VFR++D  NLLL QA +EVL +ELE+ERL + L ++ + QLD+  ++R
Sbjct: 724 RQLQASSGLFFDVFRQYDPANLLLTQAEEEVLRQELEVERLQQTLQRLQQRQLDIHQVKR 783

Query: 777 PGPLAFALLVEGMRETLSTEKLADRIARMVAELEQAANAG 816
             PLAF L+VE  RE++S+EKLADRI RMVAEL++AA  G
Sbjct: 784 TTPLAFPLMVERFRESMSSEKLADRIRRMVAELDKAAGPG 823