Pairwise Alignments

Query, 816 a.a., ATP-dependent helicase, DEAD box family from Pseudomonas putida KT2440

Subject, 1198 a.a., DEAD/DEAH box helicase domain protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 62.8 bits (151), Expect = 1e-13
 Identities = 103/409 (25%), Positives = 148/409 (36%), Gaps = 77/409 (18%)

Query: 20  FAFQRRVWAAVERGESGLLHASTGAGKTYAVWLAALRAFKPRPQGRHLAPIQVLWVTPMR 79
           +  Q R    +  G   ++   T +GKTY   L  L  F   P  R       L++ P++
Sbjct: 116 YTHQARATDLIRAGRHVVVATPTASGKTYVYNLPVLERFLSDPDAR------ALYLFPLK 169

Query: 80  ALAAD---TARALQAPLDELQLPWSVGVRSGDTNSAERARQARRLPSVLITTPESLTLLL 136
           ALA D   T   L A   +   P    +  GDT    R +  +  P+VL+T PE L L +
Sbjct: 170 ALAQDQLSTFTGLTAAWPDDARP-RAAIYDGDTTDHFRRKIRQNPPTVLLTNPEMLHLAI 228

Query: 137 T--RAKAREDFATLQLVVVDEWHELLG--NKRGVQLQLALARLRHWHPGLPTWGL-SATL 191
                +     A+L  +VVDE H   G       Q+   L R+   +   PT+   SAT+
Sbjct: 229 LPHHQQWTSLLASLAFIVVDEVHTYRGVLGAHMAQVFRRLLRVCARYGAHPTFVFCSATV 288

Query: 192 GNLQHARDVLLPQGGLLVQGR---QDKALQVDTLLPKAIERFPWAGH------------- 235
           GN       L   GG L       +  +     + PK       A H             
Sbjct: 289 GNPGELAANLTGLGGDLENKNLVGEGVSFPHTPIPPKFSNEAIHAPHPTGISGHEVHADS 348

Query: 236 -MGLKMLDQVCHEIDASASSLVFTNTRAQAEIWYQALLEARPD---WAGLIALHHASLAR 291
             G+K     C E   SAS  +   T + A    +  +   PD       I L  A+LAR
Sbjct: 349 AKGVKGARPPCGEAGGSASCDINVITESGAPQGLRHFVFVNPDDSPSTAAIQLLRAALAR 408

Query: 292 DTRD---------------W--------------------------VERSLKQGSLKAVI 310
             R                W                          +E  +  G L AVI
Sbjct: 409 GLRTIVYCQSRRMTELISMWAAEKAGPYRDRISAYRAGFLPEERRDIEARMAGGDLLAVI 468

Query: 311 CTSSLDLGVDFLPVERVLQIGSAKGIARLMQRAGRSGHAPGRRSRVTLV 359
            TS+L+LG+D   ++  + +G    +   +QR GR G A  + S V LV
Sbjct: 469 STSALELGIDIGGLDLCILVGYPGTVMSTLQRGGRVGRAQ-QESAVILV 516