Pairwise Alignments

Query, 182 a.a., putative electron transport complex protein from Pseudomonas putida KT2440

Subject, 202 a.a., NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrE (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 55.5 bits (132), Expect = 6e-13
 Identities = 44/159 (27%), Positives = 75/159 (47%), Gaps = 12/159 (7%)

Query: 33  GLACALCIALGVIGAQLLVHAVLAP----------LHIHDLALFLLLPWLALLAWGLPWL 82
           G+A  + + + V   Q++   +LAP            +  L     +  +A L   L   
Sbjct: 42  GIAVVVVLTISVPANQVIYQGLLAPGALAWAGAPEADLSFLKFITFIGVIAALVQILEMA 101

Query: 83  LAKW-RPAWPVVGLPALLLS-NAAALGLALQQTSDGTTWPTMLLKGLLTGGGFWLALMVF 140
           L K+  P +  +G+   L++ N A  G               L+ G  +G G+ LA+++ 
Sbjct: 102 LDKYFPPLYNALGIFLPLITVNCAIFGAVSFMVERDYKLGESLVFGFGSGVGWALAIVLM 161

Query: 141 ADLRQRSAHADIPNVLRGLPIELIGAGVMAMAFSGFNGM 179
           A +R++  +AD+PN LRGL I  I AG+MA+ F  F+G+
Sbjct: 162 AGIREKLKYADVPNGLRGLGITFITAGLMALGFMSFSGV 200