Pairwise Alignments

Query, 182 a.a., putative electron transport complex protein from Pseudomonas putida KT2440

Subject, 202 a.a., NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrE (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 47.4 bits (111), Expect = 2e-10
 Identities = 45/160 (28%), Positives = 75/160 (46%), Gaps = 14/160 (8%)

Query: 33  GLACALCIALGVIGAQLLVHAVLAP----------LHIHDLALFLLLPWLALLAWGLPWL 82
           G+A  + + L V   QL+   VLAP          + +  L L   +  +A L   L   
Sbjct: 42  GVAVIVVMTLAVPLNQLIYAKVLAPGALAWAGMPGIDLSYLQLITFIGVIAALVQILEMF 101

Query: 83  LAKWRPA-WPVVG--LPALLLSNAAALGLALQQTSDGTTWPTMLLKGLLTGGGFWLALMV 139
           L K+ P+ +  +G  LP L ++ A   G+      D   +    +  + +G G+ LA+++
Sbjct: 102 LDKYIPSLYDSLGIFLPLLTVNCAIFAGVIFMANRD-YNFAESAVFAMGSGTGWALAIVM 160

Query: 140 FADLRQRSAHADIPNVLRGLPIELIGAGVMAMAFSGFNGM 179
            A LR+R     IP  L+G+ I  I  G+MA+ F  F+G+
Sbjct: 161 LAGLRERMKFHAIPEGLQGIGITFITTGLMALGFMSFSGI 200