Pairwise Alignments

Query, 323 a.a., putative electron transport complex protein from Pseudomonas putida KT2440

Subject, 399 a.a., Na(+)-translocating NADH-quinone reductase subunit B (RefSeq) from Shewanella loihica PV-4

 Score =  126 bits (316), Expect = 1e-33
 Identities = 90/309 (29%), Positives = 141/309 (45%), Gaps = 32/309 (10%)

Query: 17  LACTPGLLALLWLHGWGMMLNLLLCASAALLCEALLLALRSQSLSQALNDGSALVTAVLL 76
           L    G+ AL+W      +    +  +   + E L   +R   +++        VT++L 
Sbjct: 105 LTADSGVAALMWYGACWFLPIYAVTFAVGGIWEVLFATVRGHEVNEGF-----FVTSILF 159

Query: 77  AAALPTLAPWWLPVIAASVAIGIGKQAYGGVGRNLFNPAMVGYAFVLLSFPLQMNHWPGQ 136
           A  LP   P W+  +  +  + + K+ +GG GRN  NPA+ G AF+  ++PL M+   G 
Sbjct: 160 ALTLPATIPLWMVALGITFGVVVAKEIFGGTGRNFLNPALAGRAFLFFAYPLNMS---GD 216

Query: 137 APGLLDSVQQVFAGGGQIDAWARPTLLDGLRHNRSLTIDELFASHPGF-GNIGGAGSEWV 195
              +   V   F+G   +   A+ TL  G             A    F G I G+  E  
Sbjct: 217 TTWV---VADGFSGATALSQAAQGTLEYGFNQ----------AWWDAFLGFIPGSVGEVS 263

Query: 196 NLAFLLGGLFLLQRKVISWHAPAGLLAGLLVFSLLGWNGSGSDSNGSPLL------HLFS 249
            LA LLGGL ++  ++ SW    G++ G++  SLL  N  GSD+N  P+       H+  
Sbjct: 264 TLAILLGGLVIIYTRIASWRIVGGVMVGMIAVSLL-LNAIGSDTN--PMFAMPWYWHMVL 320

Query: 250 GSTMLAAFFIATEPVSGPRDDWAKLCFGVGTGVLIYLIRTWG-SYPDGTAFAVLLMNLFA 308
           G       F+AT+PVS    + AK  +G+  G +   IR    ++P+G   A+L  NLFA
Sbjct: 321 GGFAFGMMFMATDPVSASFTNQAKWAYGILIGAMAVFIRVINPAFPEGMMLAILFANLFA 380

Query: 309 PALERMAVQ 317
           P  +   VQ
Sbjct: 381 PLFDHFVVQ 389