Pairwise Alignments

Query, 212 a.a., DNA glycosylase/apyrimidinic (AP) lyase specific for damaged pyrimidinic sites from Pseudomonas putida KT2440

Subject, 232 a.a., endonuclease III from Methanococcus maripaludis S2

 Score = 54.7 bits (130), Expect = 1e-12
 Identities = 48/154 (31%), Positives = 74/154 (48%), Gaps = 8/154 (5%)

Query: 14  HEDNPD-PKTELAYTTPFELLVAVTLSAQSTDVGVNKATARLFPVAN-TPEAIYALGVEG 71
           H +N + PKT+      FE+ +   L+  ++   V K+   L  +   TPE I  L +E 
Sbjct: 44  HPNNYEYPKTK---NQCFEVCIGAILTQNTSWPSVEKSLKNLRKLIEITPENIINLDIEQ 100

Query: 72  LSEYIKTIGLYNSKAKNVIEACRLLIERHDSQVPQTREALEALPGVGRKTANVVLNTAFR 131
           L E IK  G YN K+  +       I+ +   VP TRE L  L GVG +TA+ +L  AF+
Sbjct: 101 LKEAIKPSGYYNQKSVRLKGFSEFFIKLN--HVP-TREELLKLNGVGPETADSMLLYAFK 157

Query: 132 QPAMAVDTHIFRVSNRTGIAPGKTVLEVEKKLLK 165
            P+  VD +  R+     +  G    +  K+L +
Sbjct: 158 VPSFVVDAYTKRILINLNLIDGSEKYDKIKELFE 191