Pairwise Alignments

Query, 251 a.a., DNA-binding transcriptional repressor - GlpR-glycerol-3-phosphate from Pseudomonas putida KT2440

Subject, 285 a.a., Transcriptional Regulator, DeoR family (NCBI) from Rhodospirillum rubrum S1H

 Score =  133 bits (334), Expect = 4e-36
 Identities = 83/252 (32%), Positives = 132/252 (52%), Gaps = 12/252 (4%)

Query: 6   RQQQILELVRERGYVSIEEMAQLFVVTPQTIRRDINQLAELNLLRRYHGGA--------- 56
           R+  + E+++E GY ++ ++A+   V+  TIRRD++ + E   + R HGGA         
Sbjct: 23  RRAAVQEVLQESGYATVADLARRLEVSEMTIRRDLSVMEEDGAVVRTHGGALSVSVEREG 82

Query: 57  AYDSSIENTAYAMRADQMRDEKQRIADAVARQIPDHASLFINIGTTTESIARALLNHSHL 116
           A+D   E  A+  R  Q  D KQRIA A AR       + ++ GT++ ++A  L   S L
Sbjct: 83  AFDR--EEPAFEQRRRQRADVKQRIAQAAARLAYPRGIIGLDSGTSSLALAEELAQESDL 140

Query: 117 KVITNNLHVAAILAAKDDFEVLVAGGTVRRDGGVVGQASVDFINQFKVDFALVGISGIDE 176
           +V TNN+  +  L    +   L+ G     +  V+G  +V+ I  +  D   VG+SG   
Sbjct: 141 RVFTNNIRASTALVESRNLVYLLGGQVRHPEMSVIGPMTVNQIRGYYFDQFFVGLSGCGP 200

Query: 177 DGSLLDFDYQEVRVSQAIIANARQVILAADSSKFGRNAMVRLGSIDLVDCLVTDRTPTPA 236
            G + D+  ++  V QA I  +  VI   DSSKFGR+A+ ++  +D +D LVTD  P P 
Sbjct: 201 AG-IFDYSLEDTEVKQAFIERSGTVIALCDSSKFGRHALAQICPLDRIDILVTDAPPPPP 259

Query: 237 LTQLLNQNKIRL 248
           L Q L   ++R+
Sbjct: 260 LAQALVLAEVRV 271